Gene omics information

Query gene ID At5g42830
Gene name transferase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At5g42830834294transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.3745.0At2g18690816384unknown proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PBS.X.H.G.
0.3235.7At3g11840820357PUB24 (PLANT U-BOX 24)Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.S.X.H.G.
0.3235.7At5g01550831700LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.S.X.H.G.
0.3133.8At3g01290821309band 7 family proteinF:unknown;P:N-terminal protein myristoylation;C:mitochondrion, plasma membrane, vacuole, membrane;BOMFPAVS.X.H.G.
0.3133.8At1g18380---S.X.H.G.
0.3032.1At1g61360842430S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.2624.4At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.2522.6At4g39830830142L-ascorbate oxidase, putativeF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:endomembrane system, extracellular region;BFPMOAS.X.H.G.
0.2319.3At4g25110828614AtMC2 (metacaspase 2)F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;POMFBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
179.9100.0E-NASC-76-raw-cel-1359878900
146.099.9E-NASC-76-raw-cel-1359878976
143.899.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
114.899.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
108.599.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
107.499.9E-NASC-76-raw-cel-1359879158
83.199.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
73.499.9GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
71.299.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
68.699.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.233e-31137At5g07870830680transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.252e-28127At5g07850830678transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.354e-27123At5g07860830679transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.022e-138At5g67160836851EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1)Encodes a member of the BAHD acyltransferase superfamily. Mutants have enhanced susceptibility to virulent and avirulent pathogens and are defective in pathogen induced SA biosynthesis. EPS1 may act upstream of SA biosynthesis as application of SA can rescue the mutant phenotype.C.G.S.X.
0.017e-136At4g38560830013-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFVC.G.S.X.
0.017e-136At3g44860823620FAMT (farnesoic acid carboxyl-O-methyltransferase)Encodes a farnesoic acid carboxyl-O-methyltransferase.C.G.S.X.
0.017e-136At3g44870823621S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.017e-136At2g45510819159CYP704A2member of CYP704AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-654Glycine maxGma.17929.1.A1_atAW311001--9e-1At5g07850transferase family proteinC.G.S.X.
0.025e+032Hordeum vulgareHV_CEa0006I19r2_atHV_CEa0006I19r2--2e-1At3g60961ATP binding / nucleobase, nucleoside, nucleotide kinaseC.G.S.X.
0.021e+036Oryza sativaOsAffx.12495.1.S1_at---0C.G.S.X.
0.046e-240Populus trichocarpaPtp.3032.1.S1_s_atDN494443hypothetical protein-6e-3At5g07850transferase family proteinC.G.S.X.
0.021e+132Triticum aestivumTaAffx.30206.1.S1_atCA627135--1e-9At3g14100oligouridylate-binding protein, putativeC.G.S.X.
0.022e-136Vitis vinifera1617046_atCF512505hypothetical protein LOC100244517-2e-1At1g68160unknown proteinC.G.S.X.
0.022e-240Zea maysZm.12792.1.A1_atCA398944hypothetical protein LOC100272306-4e-1At1g69040ACR4 (ACT REPEAT 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00355Link to KaPPA-View 4Acyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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