Gene omics information

Query gene ID At5g42670
Gene name agenet domain-containing protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2420.7At5g42670834276agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:unknown;PMOS.X.H.G.
0.2217.5At2g03050814834mitochondrial transcription termination factor-related / mTERF-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMS.X.H.G.
0.114.1At4g32900829426aminoacyl-tRNA hydrolaseF:aminoacyl-tRNA hydrolase activity;P:translation;C:unknown;MOAFPVS.X.H.G.
0.114.1At5g06770830566KH domain-containing protein / zinc finger (CCCH type) family proteinF:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;MPOFS.X.H.G.
0.082.3At5g17660831632tRNA (guanine-N7-)-methyltransferaseF:tRNA (guanine-N7-)-methyltransferase activity;P:tRNA modification;C:chloroplast;BOMPFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.699.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
25.199.6GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
21.599.6GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
16.699.5GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
15.799.5GSM133953Murray_2-9_T16-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
15.099.4GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
14.999.4GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At3g58060824975cation efflux family protein / metal tolerance protein, putative (MTPc3)F:cation transmembrane transporter activity, efflux transmembrane transporter activity;P:cation transport;C:membrane;BFOPAMC.G.S.X.
0.024e-136At5g23810832446AAP7Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.C.G.S.X.
0.012e+034At5g56250835724HAP8 (HAPLESS 8)F:unknown;P:unknown;C:chloroplast;MPOFBC.G.S.X.
0.092e+034At5g52070835283agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At5g20640832187unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;PC.G.S.X.
0.012e+034At5g22320832292leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVAC.G.S.X.
0.022e+034At5g57830835893unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.66404.1.S1_atAW278767--2e-1At1g47720OSB1 (Organellar Single-stranded)C.G.S.X.
0.038e-134Hordeum vulgareHA05i14r_atHA05i14r--3e+0At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)C.G.S.X.
0.039e-136Oryza sativaOs.23415.1.A1_s_at---0C.G.S.X.
0.051e-242Populus trichocarpaPtp.4806.1.S1_atBU892143hypothetical protein-7e-3At5g42670agenet domain-containing proteinC.G.S.X.
0.032e-344Triticum aestivumTaAffx.107571.1.S1_atCA697864--1e-3At5g42670agenet domain-containing proteinC.G.S.X.
0.032e+032Vitis vinifera1618186_x_atCF206335.1--2e+0At5g42670agenet domain-containing proteinC.G.S.X.
0.022e-136Zea maysZm.18029.1.A1_atBG842376hypothetical protein LOC100191174-6e-1At5g42670agenet domain-containing proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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