Gene omics information

Query gene ID At5g41900
Gene name hydrolase, alpha/beta fold family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g41900834195hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:endomembrane system;BOMFPAVS.X.H.G.
0.5065.3At2g16630816164proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MPBOFVAS.X.H.G.
0.103.4At4g00360828019CYP86A2 (CYTOCHROME P450 86 A2)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.S.X.H.G.
0.030.6At2g26690817210nitrate transporter (NTP2)F:transporter activity;P:response to jasmonic acid stimulus, response to wounding;C:membrane;BPOMFS.X.H.G.
0.020.4At1g17840838363WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.599.8GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responses
42.999.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
38.299.8E-MEXP-557-raw-cel-879731484
35.499.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
35.099.7GSM142854MG001_ATH1_A7-Torres-3N1GSE6176Impact of Type III effectors on plant defense responses
31.399.7GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.099.7GSM244457Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
26.199.7E-MEXP-557-raw-cel-879731493
26.099.7E-MEXP-475-raw-cel-680982377
25.899.7E-MEXP-546-raw-cel-863289668
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.552e-69264At1g64670842775BDG1 (BODYGUARD1)Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.C.G.S.X.
0.035e-550At4g24140828514hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:endomembrane system;BOMPFAVC.G.S.X.
0.024e-240At1g72620843594hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOPMAFC.G.S.X.
0.012e-138At4g19515827693disease resistance family proteinF:transmembrane receptor activity;P:signal transduction, innate immune response;C:intrinsic to membrane, endomembrane system, membrane;PC.G.S.X.
0.017e-136At5g53460835427GLT1NADH-dependent glutamate synthaseC.G.S.X.
0.017e-136At5g02270831709ATNAP9member of NAP subfamilyC.G.S.X.
0.017e-136At4g14980827157-F:unknown;P:intracellular signaling cascade;C:unknown;POMFC.G.S.X.
0.027e-136At2g05645815113unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGmaAffx.5586.1.S1_atBM891172--3e-28At1g23900GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1)C.G.S.X.
0.031e-344Hordeum vulgareHVSMEc0010O09r2_atHVSMEc0010O09r2--1e+0At5g28630glycine-rich proteinC.G.S.X.
0.031e+036Oryza sativaOs06g01325009634.m00329-Alpha/beta hydrolase family protein1e-2At1g64670BDG1 (BODYGUARD1)C.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.136498.1.S1_atCF230021hypothetical protein-6e-3At1g52260ATPDIL1-5 (PDI-LIKE 1-5)C.G.S.X.
0.033e-344Triticum aestivumTaAffx.86408.2.S1_atCA653379--4e-3At1g64670BDG1 (BODYGUARD1)C.G.S.X.
0.028e-134Vitis vinifera1608849_atCF405875--1e+0At1g01910anion-transporting ATPase, putativeC.G.S.X.
0.025e+032Zea maysZmAffx.825.1.A1_atAI770513--5e-2At3g06455splicing factor-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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