Gene omics information

Query gene ID At5g41460
Gene name fringe-related protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g41460834147fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;MPFOS.X.H.G.
0.2522.6At3g57600824929AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.157.8At1g65900842902unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPAOS.X.H.G.
0.020.4At1g02180839543ferredoxin-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.010.2At3g24150822001unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.899.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
78.699.9E-ATMX-33-raw-cel-1562596197
67.799.9GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
63.299.8E-ATMX-33-raw-cel-1562596103
61.999.8GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
50.699.8E-ATMX-33-raw-cel-1562596081
41.899.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
37.099.7E-ATMX-33-raw-cel-1562596241
23.899.6GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
18.999.5GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.376e-57222At4g11350826737transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.332e-47190At4g23490828447fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;MFPOC.G.S.X.
0.094e-21103At4g00300828072fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;PFMOBC.G.S.X.
0.154e-1273At1g01570837183fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system;PFMOC.G.S.X.
0.076e-1169At1g07850837300transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation;C:chloroplast;MPFOC.G.S.X.
0.048e-446At2g37730818350fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.011e-242At5g37570833735pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.025e-240At4g00905827986-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-23109Glycine maxGmaAffx.75252.1.S1_atAI748581--1e-30At4g23490fringe-related proteinC.G.S.X.
0.024e-136Hordeum vulgareHW01B08u_atHW01B08u--2e-1At5g44540tapetum-specific protein-relatedC.G.S.X.
0.022e-346Oryza sativaOsAffx.3224.1.S1_at---0C.G.S.X.
0.111e-965Populus trichocarpaPtpAffx.210698.1.S1_atpmrna20978hypothetical protein-4e-8At4g11350transferase, transferring glycosyl groupsC.G.S.X.
0.028e-136Triticum aestivumTaAffx.66837.1.S1_atCN012844--3e-1At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
0.024e+032Vitis vinifera1619261_s_atCB982969hypothetical protein LOC100250684-2e-1At1g74520ATHVA22AC.G.S.X.
0.023e-136Zea maysZm.10195.1.A1_atBM349209--5e+0At4g11350transferase, transferring glycosyl groupsC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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