Gene omics information

Query gene ID At5g40380
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g40380834036protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.5469.5At1g64860842794SIGA (SIGMA FACTOR A)Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzymeS.X.H.G.
0.5368.6At1g23740838984oxidoreductase, zinc-binding dehydrogenase family proteinF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to cold;C:in 6 components;BOFMPAVS.X.H.G.
0.5368.6At4g02920828139unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At1g58290842198HEMA1Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.S.X.H.G.
0.5267.4At4g33010829438AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)F:glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity;P:glycine catabolic process, glycine decarboxylation via glycine cleavage system;C:mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope;OBFAMPS.X.H.G.
0.5267.4At1g18060838386unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.5267.4At3g26570822265PHT2low affinity phosphate transporterS.X.H.G.
0.5166.3At5g13630831207GUN5 (GENOMES UNCOUPLED 5)Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.S.X.H.G.
0.4963.5At5g17230831587phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseEncodes phytoene synthase.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
109.599.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
40.599.8GSM237294Shoot Selenate rep1GSE9311Gene expression in roots and shoots of plants grown on selenate
36.299.7GSM237293Shoot control rep2GSE9311Gene expression in roots and shoots of plants grown on selenate
35.099.7GSM244457Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
33.199.7GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
32.899.7E-MEXP-98-raw-cel-320188804
30.099.7GSM244445Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
29.399.7GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
28.699.7GSM244459Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
28.199.7GSM244451Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.076e-1169At1g70530843390protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.054e-963At1g19090838491RKF2 (receptor-like serine/threonine kinase 2)receptor-like serine/threonine kinase (RKF2)C.G.S.X.
0.034e-963At1g53440841779leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.024e-654At4g28670828985protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-344At4g00970827936protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.034e-344At4g21230827872protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.024e-344At4g23320828431protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.014e-344At1g61480842442S-locus protein kinase, putativeF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.088e-550Glycine maxGmaAffx.86831.1.S1_atBI785317--2e-5At5g40380protein kinase family proteinC.G.S.X.
0.025e-446Hordeum vulgareContig19845_atContig19845--4e-4At3g22750protein kinase, putativeC.G.S.X.
0.043e-552Oryza sativaOs05g0130100CB634890-Protein of unknown function DUF26 domaincontaining protein2e-5At5g40380protein kinase family proteinC.G.S.X.
0.131e-965Populus trichocarpaPtpAffx.224178.1.S1_s_atpmrna42473hypothetical protein-9e-10At5g40380protein kinase family proteinC.G.S.X.
0.041e-346Triticum aestivumTa.27455.1.A1_atCA743531--3e-5At4g23230protein kinase family proteinC.G.S.X.
0.024e-342Vitis vinifera1617596_atCF201215.1hypothetical protein LOC100264999-1e+0At4g32590ferredoxin-relatedC.G.S.X.
0.024e-136Zea maysZm.16088.1.A1_atCF046660lysM receptor-like kinase-2e-6At4g11480protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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