Gene omics information

Query gene ID At5g40050
Gene name F-box family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At5g40050834002F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
1.00100.0At1g59680842259EDA1 (embryo sac development arrest 1)F:molecular_function unknown;P:megagametogenesis;C:cellular_component unknown;PS.X.H.G.
0.8693.1At1g35610840457DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;POMS.X.H.G.
0.6781.6At5g04400830319anac077 (Arabidopsis NAC domain containing protein 77)F:DNA binding;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POBMS.X.H.G.
0.3541.6At1g50350841457-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
495.4100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
494.3100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
341.6100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
191.4100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
154.899.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
143.699.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
138.399.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
137.999.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
118.999.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
98.499.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.102e-757At5g25860832655F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PC.G.S.X.
0.023e-344At4g21450826300vesicle-associated membrane family protein / VAMP family proteinF:structural molecule activity;P:biological_process unknown;C:plasma membrane;MOFPBVC.G.S.X.
0.051e-242At3g42770823312F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.024e-240At5g38396833826F-box family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.024e-240At4g13960827030F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.054e-240At3g59200825089F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.024e-240At1g52650841697-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-136Glycine maxGmaAffx.50634.1.A1_atBI969214--3e+0At5g41850unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareContig21293_atContig21293--3e-1At5g17150-C.G.S.X.
0.011e+036Oryza sativaOs07g0654500AK122088.1-Conserved hypothetical protein9e-1At3g16720ATL2C.G.S.X.
0.031e-242Populus trichocarpaPtpAffx.216386.1.S1_atpmrna31131hypothetical protein-9e-2At2g47710universal stress protein (USP) family proteinC.G.S.X.
0.024e-240Triticum aestivumTaAffx.111127.1.S1_atCA647467--4e+0At5g12340unknown proteinC.G.S.X.
0.037e-134Vitis vinifera1618310_s_atCF210664hypothetical protein LOC100259803-1e-1At3g01970WRKY45C.G.S.X.
0.021e+034Zea maysZm.17266.1.A1_atCF245152--4e+0At1g35400-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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