Gene omics information

Query gene ID At5g39970
Gene name catalytic
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.114.1At5g39970833994catalyticF:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAFS.X.H.G.
0.4355.3At1g50520841474CYP705A27member of CYP705AS.X.H.G.
0.3643.6At3g46720823825UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFS.X.H.G.
0.3032.1At3g20960821646CYP705A33member of CYP705AS.X.H.G.
0.1912.7At2g24610816997ATCNGC14member of Cyclic nucleotide gated channel familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
102.499.9GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
72.399.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
69.999.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
64.399.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.999.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.799.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
53.599.8GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
50.699.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.399.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.799.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.152e-1171At1g74790843818catalyticF:catalytic activity;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;OBPMAFC.G.S.X.
0.135e-963At5g62630836384HIPL2 (HIPL2 PROTEIN PRECURSOR)F:catalytic activity;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;BOPMAFC.G.S.X.
0.017e-240At1g35890840491DNA bindingF:DNA binding;P:regulation of transcription;C:cellular_component unknown;POC.G.S.X.
0.013e-138At4g03180828047unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBAC.G.S.X.
0.013e-138At3g1125082029660S acidic ribosomal protein P0 (RPP0C)F:structural constituent of ribosome;P:translational elongation, response to salt stress, translation;C:cytosolic ribosome, ribosome, membrane;MOFAPBC.G.S.X.
0.013e-138At3g0920082007660S acidic ribosomal protein P0 (RPP0B)F:structural constituent of ribosome;P:translational elongation, response to salt stress, response to cold, translation;C:in 7 components;MOAFPBC.G.S.X.
0.013e-138At2g03140814843CAAX amino terminal protease family proteinF:unknown;P:proteolysis;C:nucleus;MBOFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.125e-1997Glycine maxGma.6006.1.S1_atBQ610956--7e-16At1g74790catalyticC.G.S.X.
0.023e-240Hordeum vulgareContig19960_s_atContig19960ENOD40-like protein-2e-1At1g75980-C.G.S.X.
0.041e-450Oryza sativaOs12g0639600AK122084.1-Soluble quinoprotein glucose dehydrogenase domaincontaining protein2e-8At1g74790catalyticC.G.S.X.
0.193e-1171Populus trichocarpaPtpAffx.213898.1.S1_atpmrna27100hypothetical protein-2e-11At5g39970catalyticC.G.S.X.
0.067e-550Triticum aestivumTa.5666.1.S1_atCA644554--3e-5At5g39970catalyticC.G.S.X.
0.023e-136Vitis vinifera1619747_atCF372623hypothetical protein LOC100247254-7e-5At2g22080unknown proteinC.G.S.X.
0.013e+130Zea maysZmAffx.477.1.A1_atAI677582--8e-1At5g51860MADS-box protein (AGL72)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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