Gene omics information

Query gene ID At5g38310
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At5g38310833813unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPS.X.H.G.
1.00100.0At4g38530830010ATPLC1 (ARABIDOPSIS THALIANA PHOSPHOLIPASE C 1)Encodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670.S.X.H.G.
0.7586.9At2g21910816727CYP96A5member of CYP96AS.X.H.G.
0.5773.8At2g27320817275unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
0.2930.3At1g72950843626disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
263.9100.0E-MEXP-807-raw-cel-1173273252
175.9100.0GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
167.6100.0E-MEXP-807-raw-cel-1173273144
133.399.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
131.899.9E-MEXP-807-raw-cel-1173273170
131.299.9E-MEXP-807-raw-cel-1173273116
130.699.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
106.599.9E-MEXP-807-raw-cel-1173273060
100.999.9GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
91.599.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.034e-342At5g54480835536unknown proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;BMOPFVAC.G.S.X.
0.034e-342At2g26100817150galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:chloroplast, membrane;MPOBC.G.S.X.
0.022e-240At1g69610843297structural constituent of ribosomeF:structural constituent of ribosome;P:N-terminal protein myristoylation, translation;C:ribosome, intracellular;OPMFBC.G.S.X.
0.022e-240At1g23070838915unknown proteinF:unknown;P:biological_process unknown;C:unknown;MPFOC.G.S.X.
0.032e-240At1g23710838981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBC.G.S.X.
0.037e-238At5g14440831295-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.017e-238At5g19310832051homeotic gene regulator, putativeF:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.027e-238At5g62510836371F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Glycine maxGmaAffx.41683.1.S1_atBM176987--2e-1At5g62020AT-HSFB2AC.G.S.X.
0.031e-136Hordeum vulgareContig22075_atContig22075--4e-3At3g18590plastocyanin-like domain-containing proteinC.G.S.X.
0.041e-138Oryza sativaOsAffx.23713.1.S1_at---0C.G.S.X.
0.053e-240Populus trichocarpaPtpAffx.208632.1.S1_atpmrna17132hypothetical protein-1e-6At1g24405unknown proteinC.G.S.X.
0.043e-136Triticum aestivumTaAffx.27063.1.S1_atCA681704--7e-1At1g70770unknown proteinC.G.S.X.
0.041e-342Vitis vinifera1620697_atCF568836--1e+0At3g13857unknown proteinC.G.S.X.
0.053e-238Zea maysZmAffx.1083.1.A1_atAI974922--1e+0At1g59830PP2A-1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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