Gene omics information

Query gene ID At5g38030
Gene name MATE efflux family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At5g38030833782MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAMS.X.H.G.
1.00100.0At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.S.X.H.G.
0.8693.1At5g47990834850CYP705A5encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings.S.X.H.G.
0.8693.1At5g48000834851CYP708A2Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation.S.X.H.G.
0.7586.9At3g45710823713proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMOFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
99.099.9GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
88.999.9GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
76.899.9GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)
70.199.9GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)
61.499.8GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)
59.599.8GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
53.299.8GSM133121S0_12H_AGSE5688AtGenExpress: Response to sulfate limitation
52.099.8GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)
51.099.8GSM131571ATGE_98_BGSE5631AtGenExpress: Developmental series (roots)
49.899.8GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8601610At3g26590822267MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:plasma membrane, vacuole, membrane;BOPFAMC.G.S.X.
0.506e-63242At1g12950837853MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.043e-963At5g65380836663ripening-responsive protein, putativeF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport, ripening;C:membrane;BPOFMAC.G.S.X.
0.043e-963At4g00350827306MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.082e-757At1g23300838939MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.061e-552At1g11670837711MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAMC.G.S.X.
0.063e-344At1g61890842485MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.035e-240At5g44050834428MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.022e-138At5g37520833730unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-1479Glycine maxGmaAffx.24367.1.A1_atBU545255--2e-21At1g12950MATE efflux family proteinC.G.S.X.
0.021e+034Hordeum vulgareHVSMEl0020G17r2_x_atHVSMEl0020G17r2--2e+0At1g69180CRC (CRABS CLAW)C.G.S.X.
0.032e+036Oryza sativaOsAffx.24286.1.S1_at---0C.G.S.X.
0.052e-242Populus trichocarpaPtpAffx.224348.1.S1_atpmrna42814--4e-21At1g61890MATE efflux family proteinC.G.S.X.
0.028e-136Triticum aestivumTa.1621.1.A1_atBJ284076--3e-3At1g11670MATE efflux family proteinC.G.S.X.
0.051e-344Vitis vinifera1621987_atCA818803hypothetical protein LOC100262309-9e-15At1g11670MATE efflux family proteinC.G.S.X.
0.025e+032Zea maysZm.6703.1.A1_atCA398710hypothetical protein LOC100273224-1e+0At2g01120ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009624A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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