Gene omics information

Query gene ID At5g37740
Gene name C2 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4152.4At5g37740833752C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOS.X.H.G.
0.5974.7At5g50760835148auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
0.5570.6At3g26470822252-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4152.4At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.4050.8At5g65210836646TGA1F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POMS.X.H.G.
0.3745.0At4g05200825868protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.3541.6At1g35260840415MLP165 (MLP-LIKE PROTEIN 165)F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.3338.1At4g17800827502DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOFS.X.H.G.
0.3338.1At4g18360827563(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:peroxisome;OBFMPAS.X.H.G.
0.2930.3At1g22440838850alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.999.8GSM157336Coates_1-8_ara1/2mut_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
36.099.7GSM157335Coates_1-7_Col-3_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
35.399.7GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
34.499.7GSM157331Coates_1-3_Col-3_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
32.499.7GSM157339Coates_1-11_Col-3_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
31.399.7E-MEXP-1797-raw-cel-1669767976
29.299.7GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
28.799.7GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
25.999.7GSM142593DB001_ATH1_A3-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cells
25.999.7GSM142594DB001_ATH1_A4-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cells
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.343e-446At1g66360842954C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOC.G.S.X.
0.021e+034At5g16220831481octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.031e+034At3g47470823901LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.C.G.S.X.
0.024e+032At4g20900827838MS5 (MALE-STERILE 5)ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein.C.G.S.X.
0.024e+032At4g17840827507unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVC.G.S.X.
0.024e+032At3g51280824291male sterility MS5, putativeF:binding;P:unknown;C:cellular_component unknown;OBPAFC.G.S.X.
0.034e+032At3g03100821104NADH:ubiquinone oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity;P:unknown;C:mitochondrion, respiratory chain complex I;OBMFPC.G.S.X.
0.034e+032At3g66656819848AGL91F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-238Glycine maxGma.15359.2.S1_a_atAW781747--7e-2At1g70790C2 domain-containing proteinC.G.S.X.
0.037e+030Hordeum vulgareHU11J20u_atHU11J20u--4e+0At3g09940MDHAR (MONODEHYDROASCORBATE REDUCTASE)C.G.S.X.
0.048e+032Oryza sativaOsAffx.25792.1.S1_at---0C.G.S.X.
0.084e-446Populus trichocarpaPtpAffx.30004.1.S1_atCV247109hypothetical protein-6e-7At1g48590C2 domain-containing proteinC.G.S.X.
0.042e-240Triticum aestivumTaAffx.77816.1.S1_atCA742437--1e-2At5g37740C2 domain-containing proteinC.G.S.X.
0.067e-236Vitis vinifera1618364_atCF514983hypothetical protein LOC100260351-2e-6At1g48590C2 domain-containing proteinC.G.S.X.
0.037e+030Zea maysZm.8920.2.S1_a_atAI833664--8e-1At5g15220ribosomal protein L27 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage