CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g37690

Gene name GDSL-motif lipase/hydrolase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g37690 833748 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.93 96.4 At2g23540 816886 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.88 94.0 At2g35380 818105 peroxidase 20 (PER20) (P20) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB S.X. H.G.
0.88 94.0 At4g20390 827787 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.86 93.1 At5g44550 834482 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.83 91.4 At2g47200 819333 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At5g58860 836003 CYP86A1 (CYTOCHROME P450 86 A1) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue. S.X. H.G.
0.63 78.1 At4g38080 829964 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
146.2 99.9 GSM226542 L12SB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
101.2 99.9 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
67.1 99.8 GSM131378 AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
58.7 99.8 GSM218596 Whole roots 3.5hr KNO3 treated then frozen, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
58.0 99.8 E-MEXP-828-raw-cel-1156922987
57.6 99.8 E-MEXP-828-raw-cel-1156922809
55.4 99.8 E-MEXP-828-raw-cel-1156922968
54.8 99.8 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
51.8 99.8 E-MEXP-828-raw-cel-1156922891
51.3 99.8 E-MEXP-828-raw-cel-1156922905
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 4e-5 50 At4g16220 827316 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PM C.G. S.X.
0.02 1e-1 38 At2g18360 816351 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:endomembrane system;BOMPFA C.G. S.X.
0.02 5e-1 36 At3g47800 823934 aldose 1-epimerase family protein F:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;BOMFPA C.G. S.X.
0.02 5e-1 36 At2g42990 818901 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM C.G. S.X.
0.02 5e-1 36 At2g16780 816179 MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2) Encodes a WD-40 repeat protein similar to yeast MSI1. C.G. S.X.
0.02 5e-1 36 At1g31000 839986 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 2e+0 34 At5g49020 834961 PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A) Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. C.G. S.X.
0.02 2e+0 34 At5g41890 834194 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;PBOFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-3 44 Glycine max GmaAffx.34630.1.A1_at AW348454 - - 6e-1 At5g66211 unknown protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare Contig15515_at Contig15515 - - 1e+0 At1g56210 copper chaperone (CCH)-related C.G. S.X.
0.03 4e+0 34 Oryza sativa OsAffx.13934.1.S1_at - - - 0 C.G. S.X.
0.10 1e-5 52 Populus trichocarpa PtpAffx.203981.1.S1_at pmrna7854 - - 9e-6 At5g37690 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 9e+0 32 Triticum aestivum TaAffx.30418.1.S1_at CA625493 - - 3e+0 At5g37690 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1616672_at CF516136 hypothetical protein LOC100252527 - 2e-2 At3g24590 PLSP1 (plastidic type I signal peptidase 1) C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.256.1.A1_at AI670296 - - 3e+0 At5g37690 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006629 The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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