Gene omics information

Query gene ID At5g37300
Gene name WSD1
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At5g37300833704WSD1Encodes a bifunctional enzyme, wax ester synthase (WS) and diacylglycerol acyltransferase (DGAT). In vitro assay indicated a ratio of 10.9 between its WS and DGAT activities. Both mutant and in vivo expression/analysis in yeast studies indicated a role in wax biosynthesis.S.X.H.G.
0.7586.9At3g15270820758SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.S.X.H.G.
0.4050.8At1g69120843244AP1 (APETALA1)Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.S.X.H.G.
0.4050.8At4g00870827990basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOS.X.H.G.
0.2522.6At4g14695827120unknown proteinF:unknown;P:biological_process unknown;C:mitochondrion;MFPOS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.899.9GSM62701arf6/arf6 ARF8/arf8_stemGSE2848Auxin Response Factor mediated flower gene expression
68.899.9GSM62697Columbia_stemGSE2848Auxin Response Factor mediated flower gene expression
65.799.8GSM47015Ler 5GSE2473Small RNA biogenesis mutants
63.099.8GSM47014Ler 4GSE2473Small RNA biogenesis mutants
55.699.8GSM62696Columbia flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expression
55.499.8GSM67078Arabidopsis_Ovary01GSE3056Arabidopsis Pollination Study
50.699.8GSM47020Col-0 10GSE2473Small RNA biogenesis mutants
50.099.8GSM47044rdr1-1 34GSE2473Small RNA biogenesis mutants
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.402e-50200At2g38995818485-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.383e-1893At2g43255818927unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.131e-1171At1g72110843542unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFC.G.S.X.
0.035e-550At3g49200824081unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.037e-446At5g12420831117unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFC.G.S.X.
0.027e-446At5g53390835420unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.013e-344At5g35220833476EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis.C.G.S.X.
0.041e-242At3g49210824082unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.67575.1.A1_atBE824256--3e+0At5g15830AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)C.G.S.X.
0.029e-238Hordeum vulgareContig26251_atContig26251--2e+0At3g16970self-incompatibility protein-relatedC.G.S.X.
0.024e-138Oryza sativaOsAffx.31869.3.S1_at---0C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.220164.1.S1_atpmrna36518hypothetical protein-1e+1At5g38890exoribonuclease-relatedC.G.S.X.
0.028e-136Triticum aestivumTaAffx.7871.1.S1_atCA646169--3e+0At1g19070F-box family proteinC.G.S.X.
0.022e-136Vitis vinifera1619518_atCB982195hypothetical protein LOC100267790-3e-7At2g45620nucleotidyltransferase family proteinC.G.S.X.
0.025e+032Zea maysZm.14937.1.A1_atCB816489--3e-1At5g04780-C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010025The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage