CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g37010

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At5g37010 833671 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;MOFBPVA S.X. H.G.
0.50 65.3 At1g63470 842653 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFBO S.X. H.G.
0.40 50.8 At1g53140 841748 dynamin family protein Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis. S.X. H.G.
0.29 30.3 At1g16070 838177 AtTLP8 (TUBBY LIKE PROTEIN 8) Member of TLP family S.X. H.G.
0.13 5.8 At2g25270 817065 unknown protein F:unknown;P:unknown;C:plasma membrane;POBM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
142.5 99.9 GSM133758 Lindsey_1-11_heart-stage-root_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
83.9 99.9 GSM133776 Lindsey_1-1_globular-apical_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
78.4 99.9 GSM133756 Lindsey_1-10_heart-stage-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
70.4 99.9 GSM133766 Lindsey_1-18_torpedo-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
60.9 99.8 GSM133755 Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
42.2 99.8 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
32.5 99.7 GSM133774 Lindsey_1-26_torpedo-meristem_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
30.8 99.7 GSM133763 Lindsey_1-15_torpedo-cotyledon_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
28.6 99.7 GSM242959 Steroid day 3 (day3D1) GSE9605 Target genes of AGAMOUS during early flower development in Arabidopsis
27.1 99.7 GSM242955 Steroid day 1 (day1D1) GSE9605 Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.14 7e-14 79 At1g65710 842882 unknown protein F:unknown;P:N-terminal protein myristoylation;C:unknown;MOFPBV C.G. S.X.
0.01 6e-2 40 At5g51850 835260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFB C.G. S.X.
0.01 6e-2 40 At2g23093 816840 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMBOF C.G. S.X.
0.00 2e-1 38 At4g17140 827424 - F:molecular_function unknown;P:biological_process unknown;C:vacuole;MOFPB C.G. S.X.
0.01 2e-1 38 At1g61580 842454 RPL3B (R-PROTEIN L3 B) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, membrane;BOMAPFV C.G. S.X.
0.01 2e-1 38 At1g32100 840102 PRR1 (PINORESINOL REDUCTASE 1) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. C.G. S.X.
0.02 2e-1 38 At1g29770 839855 NLI interacting factor (NIF) family protein F:phosphatase activity;P:biological_process unknown;C:unknown;MOFPVB C.G. S.X.
0.02 2e-1 38 At1g75190 843856 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFVPBA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Glycine max PsAffx.psMY010iA11r_at PsAffx.psMY010iA11r - - 1e+1 At4g38790 ER lumen protein retaining receptor family protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HV_CEa0006M01r2_at HV_CEa0006M01r2 - - 3e-1 At2g27750 nucleolar matrix protein-related C.G. S.X.
0.02 2e+0 36 Oryza sativa Os09g0490100 CA761560 - Hypothetical protein 4e+0 At5g65910 BSD domain-containing protein C.G. S.X.
0.03 5e-3 44 Populus trichocarpa PtpAffx.86793.1.A1_at CV269476 - - 2e-3 At5g37010 unknown protein C.G. S.X.
0.02 4e+0 34 Triticum aestivum TaAffx.29139.1.S1_at CA649626 - - 3e+0 At3g28070 nodulin MtN21 family protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1612462_at CF605002 hypothetical protein LOC100252558 - 3e-4 At2g14900 gibberellin-regulated family protein C.G. S.X.
0.01 2e+0 34 Zea mays Zm.3538.1.A1_at AW065311 - - 6e-5 At3g27580 ATPK7 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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