Gene omics information

Query gene ID At5g28680
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g28680832975protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8592.4At3g20190821563leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOFBVAS.X.H.G.
0.8391.4At1g14420838004AT59F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFOS.X.H.G.
0.7788.0At2g26410817181Iqd4 (IQ-domain 4)F:calmodulin binding;P:unknown;C:unknown;PMOBVFAS.X.H.G.
0.7284.8At3g02970821168EXL6 (EXORDIUM LIKE 6)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6982.9At1g66210842936subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOMFAS.X.H.G.
0.6781.6At1g68110843139epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFOS.X.H.G.
0.6781.6At3g09530820110ATEXO70H3 (exocyst subunit EXO70 family protein H3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.6176.7At2g23900816922glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.6075.7At2g26450817185pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
231.7100.0E-ATMX-35-raw-cel-1574334880
214.1100.0GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
207.7100.0E-MEXP-285-raw-cel-440782791
196.4100.0E-MEXP-285-raw-cel-440782725
181.3100.0E-ATMX-35-raw-cel-1574334864
160.299.9GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
146.699.9E-MEXP-1138-raw-cel-1432772682
137.699.9GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
136.699.9E-MEXP-1138-raw-cel-1432772522
134.699.9E-MEXP-1138-raw-cel-1432772586
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.720763At3g04690819627protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.042e-1585At3g51550824318FER (FERONIA)Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.C.G.S.X.
0.064e-1377At5g59700836091protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.052e-1275At1g30570839937protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.041e-965At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.059e-859At3g46290823774protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.036e-654At2g39360818521protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.022e-552At4g39110830066protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAC.G.S.X.
0.039e-550At5g24010832466protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-759Glycine maxGmaAffx.32694.1.S1_atBM522597--3e-31At3g46290protein kinase, putativeC.G.S.X.
0.012e-138Hordeum vulgareHT09L21r_atHT09L21r--5e-3At3g42310unknown proteinC.G.S.X.
0.042e-759Oryza sativaOs03g0333200AK099791.1-Resistance protein candidate (Fragment)2e-58At3g51550FER (FERONIA)C.G.S.X.
0.082e-965Populus trichocarpaPtp.3831.1.S1_atCV244155hypothetical protein-9e-65At3g51550FER (FERONIA)C.G.S.X.
0.039e-240Triticum aestivumTa.26337.1.A1_atCD490755--3e-8At5g24010protein kinase family proteinC.G.S.X.
0.052e-654Vitis vinifera1618678_atAY427137.1--4e-3At3g51550FER (FERONIA)C.G.S.X.
0.022e+034Zea maysZm.4442.1.A1_atAY110671.1--1e-4At5g56790protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009860Growth of pollen via tip extension of the intine wall.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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