CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g28650

Gene name WRKY74

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.43 55.3 At5g28650 832971 WRKY74 member of WRKY Transcription Factor; Group II-d S.X. H.G.
0.50 65.3 At1g49320 841355 BURP domain-containing protein F:molecular_function unknown;P:unknown;C:endomembrane system;P S.X. H.G.
0.50 65.3 At4g37970 829953 CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6) F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
0.32 35.7 At4g33450 829482 MYB69 (MYB DOMAIN PROTEIN 69) Member of the R2R3 factor gene family. S.X. H.G.
0.31 33.8 At4g00940 827952 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
224.1 100.0 GSM142631 MC002_ATH1_A3.3-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
154.0 99.9 GSM142636 MC002_ATH1_A5.2-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
144.6 99.9 GSM142624 MC002_ATH1_A1.2-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
137.6 99.9 GSM142629 MC002_ATH1_A3.1-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
130.1 99.9 GSM142625 MC002_ATH1_A1.3-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
116.0 99.9 GSM142623 MC002_ATH1_A1.1-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
99.6 99.9 GSM142630 MC002_ATH1_A3.2-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
88.1 99.9 GSM142637 MC002_ATH1_A5.3-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
79.8 99.9 GSM142635 MC002_ATH1_A5.1-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
73.1 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.53 8e-80 297 At3g04670 819625 WRKY39 member of WRKY Transcription Factor; Group II-d C.G. S.X.
0.20 7e-31 135 At2g30590 817609 WRKY21 Encodes WRKY DNA-binding protein 21 (WRKY21). C.G. S.X.
0.08 9e-12 71 At2g23320 816864 WRKY15 Encodes WRKY DNA-binding protein 15 (WRKY15). C.G. S.X.
0.16 4e-11 69 At4g24240 828525 WRKY7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. C.G. S.X.
0.07 3e-5 50 At4g31550 829282 WRKY11 member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae. C.G. S.X.
0.03 2e-3 44 At5g01900 831826 WRKY62 member of WRKY Transcription Factor; Group III C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 5e-5 50 Glycine max Gma.15748.1.A1_at AI900530 transcription factor - 2e-5 At5g28650 WRKY74 C.G. S.X.
0.20 2e-26 119 Hordeum vulgare Contig23011_at Contig23011 - - 3e-26 At5g28650 WRKY74 C.G. S.X.
0.11 3e-28 127 Oryza sativa Os12g0597700 AK070648.1 - Probable WRKY transcription factor 15 (WRKYDNA-binding protein 15) 4e-28 At5g28650 WRKY74 C.G. S.X.
0.27 1e-39 165 Populus trichocarpa PtpAffx.61240.1.A1_at DN487796 hypothetical protein - 6e-40 At5g28650 WRKY74 C.G. S.X.
0.11 3e-8 59 Triticum aestivum Ta.14320.1.A1_at BU100245 WRKY16 transcription factor - 4e-8 At5g28650 WRKY74 C.G. S.X.
0.07 2e-3 42 Vitis vinifera 1619424_at BQ800205 hypothetical protein LOC100267695 - 5e-9 At4g23550 WRKY29 C.G. S.X.
0.14 7e-23 107 Zea mays Zm.9098.1.A1_a_at BM336161 Hypothetical protein LOC100192894 - 6e-6 At4g31550 WRKY11 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
L GO:0045449 Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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