Gene omics information

Query gene ID At5g28640
Gene name AN3 (ANGUSTIFOLIA 3)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At5g28640832968AN3 (ANGUSTIFOLIA 3)Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.S.X.H.G.
0.6781.6At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.S.X.H.G.
0.6478.9At4g29030829024glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAS.X.H.G.
0.5974.7At2g26330817173ER (ERECTA)Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.S.X.H.G.
0.5974.7At3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.5673.0At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.S.X.H.G.
0.5368.6At1g67040843024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.5368.6At2g45190819127AFO (ABNORMAL FLORAL ORGANS)Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).S.X.H.G.
0.4862.5At5g65410836666HB25 (HOMEOBOX PROTEIN 25)Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.S.X.H.G.
0.4659.8At3g02210821245COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
80.699.9GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
69.399.9GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seeds
68.399.9GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
65.899.8GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seeds
58.699.8GSM131671ATGE_48_BGSE5633AtGenExpress: Developmental series (shoots and stems)
54.899.8GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-136At5g57180835824CIA2 (CHLOROPLAST IMPORT APPARATUS 2)Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.C.G.S.X.
0.023e-136At5g39570833953unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus;POC.G.S.X.
0.023e-136At4g11300826732unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOC.G.S.X.
0.063e-136At4g00850827995GIF3 (GRF1-INTERACTING FACTOR 3)Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNAC.G.S.X.
0.023e-136At3g23210821899basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBAC.G.S.X.
0.023e-136At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.227e-40165Glycine maxGma.8684.1.S1_atAW317180--1e-39At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.034e-238Hordeum vulgareHF24I04r_atHF24I04r--8e-2At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.024e-240Oryza sativaOs.56806.1.S1_at---0C.G.S.X.
0.269e-27121Populus trichocarpaPtpAffx.14349.1.S1_atCV242146hypothetical protein-1e-26At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.043e-136Triticum aestivumTaAffx.85201.1.S1_atCA624822--2e-1At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.031e+032Vitis vinifera1606909_atCF608589hypothetical protein LOC100244670-9e-32At5g51600PLE (PLEIADE)C.G.S.X.
0.035e-134Zea maysZm.4439.1.A1_a_atCA404865--2e+1Atmg01240-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0008283The multiplication or reproduction of cells, resulting in the expansion of a cell population.
XGO:0048366The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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