Gene omics information

Query gene ID At5g27150
Gene name NHX1 (NA+/H+ EXCHANGER)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g27150832773NHX1 (NA+/H+ EXCHANGER)Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.S.X.H.G.
0.4761.2At3g03860821101ATAPRL5 (APR-like 5)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.S.X.H.G.
0.4761.2At4g38250829982amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAVS.X.H.G.
0.4558.3At3g04090819564SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A)Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.S.X.H.G.
0.4253.9At4g39080830063VHA-A3 (VACUOLAR PROTON ATPASE A3)Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.S.X.H.G.
0.3948.4At1g71090843449auxin efflux carrier family proteinF:auxin:hydrogen symporter activity;P:auxin polar transport;C:integral to membrane;FPOBAS.X.H.G.
0.3846.7At1g32400840133TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses.S.X.H.G.
0.3745.0At4g32530829388vacuolar ATP synthase, putative / V-ATPase, putativeF:ATPase activity;P:ATP synthesis coupled proton transport;C:vacuole;MFOPBAS.X.H.G.
0.3643.6At3g28710822502H+-transporting two-sector ATPase, putativeF:hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:vacuolar membrane, plasma membrane, vacuole, plant-type vacuole;MFOPABS.X.H.G.
0.3541.6At4g21790828267TOM1 (TOBAMOVIRUS MULTIPLICATION 1)encodes a host factor that is required for TMV virus multiplication.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.299.7E-MEXP-1443-raw-cel-1581869573
23.099.6GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.899.5E-MEXP-1443-raw-cel-1581869515
17.799.5GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.399.5GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.299.5GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
15.499.5GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.199.4GSM184895Arabidopsis, root cells, cortex, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
13.199.4GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responses
13.199.4GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7301134At3g05030819665NHX2 (SODIUM HYDROGEN EXCHANGER 2)member of Sodium proton exchanger familyC.G.S.X.
0.276e-2099At3g06370819811NHX4 (SODIUM HYDROGEN EXCHANGER 4)member of Sodium proton exchanger familyC.G.S.X.
0.121e-242At5g55470835640ATNHX3member of Sodium proton exchanger familyC.G.S.X.
0.025e-240At2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMVC.G.S.X.
0.018e-136At5g65490836674-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVAC.G.S.X.
0.018e-136At4g14370827081phosphoinositide bindingF:phosphoinositide binding;P:signal transduction, defense response;C:intrinsic to membrane;PMOBFVAC.G.S.X.
0.023e+034At5g01440831886insulin-degrading enzyme-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.279e-1789Glycine maxGmaAffx.70783.1.S1_atBQ612167sodium/proton antiporter-2e-17At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.152e-1583Hordeum vulgareContig16875_atContig16875vacuolar Na+/H+ antiporter-3e-15At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.253e-45184Oryza sativaOs07g0666900AY324877.1-Na/H antiporter Nhx17e-33At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.473e-53210Populus trichocarpaPtpAffx.210954.1.S1_atpmrna21521sodium proton exchanger-3e-53At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.172e-44180Triticum aestivumTa.24748.1.S1_atAY040246.2Na+/H+ antiporter-4e-44At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.251e-30133Vitis vinifera1622021_atCF209010hypothetical protein LOC100259022-3e-61At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.156e-1581Zea maysZm.14983.1.S1_atAY270036.1Na+/H+ antiporter NHX1-1e-14At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006814The directed movement of sodium ions (Na+) into, out of, within or between cells.
XGO:0010351The directed movement of lithium ion into, out of, within or between cells.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
XGO:0048366The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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