Gene omics information

Query gene ID At5g26930
Gene name zinc finger (GATA type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At5g26930832751zinc finger (GATA type) family proteinF:transcription factor activity, sequence-specific DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMS.X.H.G.
0.8391.4At2g14960815985GH3.1encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.S.X.H.G.
0.8391.4At2g42440818844-F:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8391.4At3g58190824988LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)This gene contains two auxin-responsive element (AuxRE).S.X.H.G.
0.8391.4At4g37295829884unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7788.0At2g39370818522unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
590.9100.0GSM75510Col-0 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
498.7100.0GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
332.9100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
191.7100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
173.6100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
158.599.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
157.699.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
147.999.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
147.699.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
142.699.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-240At1g51600841585TIFY2Amember of a novel family of plant-specific GATA-type transcription factors.C.G.S.X.
0.024e-238At3g01630819891-F:unknown;P:unknown;C:unknown;PBOFAMC.G.S.X.
0.032e-136At4g33350829471chloroplast inner membrane import protein Tic22, putativeF:unknown;P:unknown;C:mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope;BPOC.G.S.X.
0.032e-136At3g09050820058unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;MPOBAFC.G.S.X.
0.032e-136At1g14680838030unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.017e-134At5g22800832343EMB1030 (EMBRYO DEFECTIVE 1030)F:alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding;P:embryonic development ending in seed dormancy, alanyl-tRNA aminoacylation;C:mitochondrion, chloroplast stroma, chloroplast, membrane;OBMAFPC.G.S.X.
0.037e-134At5g67140836849F-box family proteinF:unknown;P:unknown;C:cellular_component unknown;MPFOBC.G.S.X.
0.027e-134At4g20360827784ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B)F:GTP binding, translation elongation factor activity, GTPase activity;P:peptidyl-cysteine S-nitrosylation;C:in 9 components;BOMFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-344Glycine maxGma.17509.1.S1_atBG650003--5e-4At5g26930zinc finger (GATA type) family proteinC.G.S.X.
0.045e+030Hordeum vulgareContig4456_s_atContig4456--2e-1At1g68870unknown proteinC.G.S.X.
0.051e+034Oryza sativaOs09g0241200AK120155.1-Conserved hypothetical protein9e-1At5g26930zinc finger (GATA type) family proteinC.G.S.X.
0.112e-550Populus trichocarpaPtpAffx.48203.2.A1_a_atDN492254hypothetical protein-3e-7At5g49300zinc finger (GATA type) family proteinC.G.S.X.
0.043e+032Triticum aestivumTaAffx.121618.4.S1_atCA674363--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.075e-546Vitis vinifera1618519_atCF214731hypothetical protein LOC100253375-3e-5At5g49300zinc finger (GATA type) family proteinC.G.S.X.
0.031e+032Zea maysZm.4367.1.S1_atAY107325.1mitochondrial import receptor subunit TOM22-1e-4At5g43970TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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