CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g26360

Gene name chaperonin, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At5g26360 832705 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:unknown;BOMFPAV S.X. H.G.
0.74 86.1 At5g20890 832213 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:anchored to plasma membrane, cell wall;BOMFPA S.X. H.G.
0.61 76.7 At5g26710 832718 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative F:glutamate-tRNA ligase activity;P:glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAP S.X. H.G.
0.60 75.7 At3g02530 821160 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:membrane, cytoplasm;BOMFPA S.X. H.G.
0.59 74.7 At3g18190 821346 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:unknown;BOMFPAV S.X. H.G.
0.55 70.6 At3g03960 819549 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:membrane;BOMFAP S.X. H.G.
0.54 69.5 At3g11830 820356 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:cellular_component unknown;BOMFPA S.X. H.G.
0.50 65.3 At3g20050 821544 ATTCP-1 Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). S.X. H.G.
0.48 62.5 At1g55890 842039 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POMFBA S.X. H.G.
0.45 58.3 At1g26460 839187 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.0 99.4 E-ATMX-13-raw-cel-1556149823
14.7 99.4 GSM133959 Fukuda_1-4_2B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
14.5 99.4 E-ATMX-13-raw-cel-1556149855
14.0 99.4 GSM133974 Birnbaum_1-4_StageI-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
14.0 99.4 E-ATMX-13-raw-cel-1556149935
13.6 99.4 E-ATMX-13-raw-cel-1556149903
12.9 99.3 E-ATMX-13-raw-cel-1556149887
12.3 99.3 GSM142905 WW002_ATH1_A1-willa-CON-REP3 GSE6181 Assembly of the cell wall pectic matrix.
12.1 99.3 E-ATMX-13-raw-cel-1556149775
11.9 99.3 E-ATMX-13-raw-cel-1556149839
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e-1 38 At5g39030 833895 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.01 2e-1 38 At5g39590 833955 - F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOPF C.G. S.X.
0.01 2e-1 38 At4g33360 829473 terpene cyclase/mutase-related F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, terpenoid metabolic process, metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPFMAV C.G. S.X.
0.01 8e-1 36 At5g44590 834487 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PBOMA C.G. S.X.
0.01 8e-1 36 At4g35080 829660 high-affinity nickel-transport family protein F:nickel ion transmembrane transporter activity, metal ion binding;P:nickel ion transport, metal ion transport;C:integral to membrane, chloroplast;OBPMA C.G. S.X.
0.01 8e-1 36 At3g54800 824645 pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein F:phosphoinositide binding;P:signal transduction;C:unknown;POM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 7e-101 369 Glycine max Gma.6692.1.S1_at AW309658 - - 4e-101 At5g26360 chaperonin, putative C.G. S.X.
0.22 5e-16 85 Hordeum vulgare Contig9215_at Contig9215 - - 8e-16 At5g26360 chaperonin, putative C.G. S.X.
0.59 1e-72 276 Oryza sativa Os02g0247200 AK102024.1 - T-complex protein 1, gamma subunit (TCP-1-gamma)(CCT-gamma) (Matricin) 6e-73 At5g26360 chaperonin, putative C.G. S.X.
0.60 3e-103 377 Populus trichocarpa PtpAffx.7885.2.S1_at BI138978 hypothetical protein - 1e-103 At5g26360 chaperonin, putative C.G. S.X.
0.38 1e-46 188 Triticum aestivum Ta.2554.1.S1_x_at CK210349 - - 1e-46 At5g26360 chaperonin, putative C.G. S.X.
0.29 4e-49 194 Vitis vinifera 1610737_at CB346253 hypothetical protein LOC100255417 - 7e-49 At5g26360 chaperonin, putative C.G. S.X.
0.53 8e-33 141 Zea mays Zm.16810.1.A1_at CF053948 T-complex protein 1 subunit gamma - 3e-32 At5g26360 chaperonin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006457 The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
L GO:0044267 The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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