Gene omics information

Query gene ID At5g26230
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g26230832692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVS.X.H.G.
0.2522.6At1g16020838172unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.2522.6At5g02410831764DIE2/ALG10 familyF:transferase activity, transferring hexosyl groups;P:biological_process unknown;C:endomembrane system, integral to membrane;FMOPS.X.H.G.
0.2319.3At4g37630829917CYCD5core cell cycle genesS.X.H.G.
0.2217.5At3g54790824644armadillo/beta-catenin repeat family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVS.X.H.G.
0.1811.4At3g60630825234scarecrow transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POBMS.X.H.G.
0.1710.2At3g07200819908zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVS.X.H.G.
0.157.8At1g08960837416CAX11member of Potassium-dependent sodium-calcium exchanger like-familyS.X.H.G.
0.103.4At1g78690844205phospholipid/glycerol acyltransferase family proteinF:acyltransferase activity;P:metabolic process;C:unknown;BMOFPS.X.H.G.
0.103.4At5g05820830467phosphate translocator-relatedF:organic anion transmembrane transporter activity;P:unknown;C:unknown;PMFOBAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
123.199.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
105.799.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
47.199.8GSM226531L1SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
41.499.8GSM133770Lindsey_1-22_torpedo-apical_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
40.499.8GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
30.599.7GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
29.799.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
28.199.7GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
25.599.7GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
24.799.6GSM184482Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.082e-1377At5g42750834284BKI1 (BRI1 kinase inhibitor 1)Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1.C.G.S.X.
0.038e-342At2g32130817772-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.028e-342At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOC.G.S.X.
0.028e-342At2g40220818614ABI4 (ABA INSENSITIVE 4)encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.C.G.S.X.
0.028e-342At1g28680839768transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.023e-240At5g19260832046unknown proteinF:unknown;P:unknown;C:unknown;MOFPBVC.G.S.X.
0.023e-240At3g54700824635carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporterF:phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, phosphate transport;C:plasma membrane, membrane;BFMPOAC.G.S.X.
0.023e-240At3g24610822057kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.043e-240At2g38300818410DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-448Glycine maxGma.1816.2.S1_atAI461081--4e-4At5g26230unknown proteinC.G.S.X.
0.051e-344Hordeum vulgareContig17903_atContig17903--1e-3At5g26230unknown proteinC.G.S.X.
0.036e-240Oryza sativaOsAffx.30022.1.S1_at---0C.G.S.X.
0.092e-757Populus trichocarpaPtpAffx.102068.1.A1_atCV240463hypothetical protein-2e-7At5g26230unknown proteinC.G.S.X.
0.033e-240Triticum aestivumTa.4127.3.S1_a_atCA729644--4e+0At3g29780RALFL27 (ralf-like 27)C.G.S.X.
0.096e-754Vitis vinifera1620166_atCB982324hypothetical protein LOC100266613-3e-6At5g26230unknown proteinC.G.S.X.
0.039e-134Zea maysZm.6905.4.S1_a_atAI881845Histone H1-like protein-2e-1At1g07980NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage