CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g26200

Gene name mitochondrial substrate carrier family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.62 77.3 At5g26200 832689 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.83 91.4 At5g39890 833986 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO S.X. H.G.
0.80 89.8 At1g33055 840201 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.80 89.8 At4g33560 829495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.78 88.6 At5g66985 836833 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.69 82.9 At2g17850 816295 - F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMF S.X. H.G.
0.69 82.9 At5g10040 830868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.64 78.9 At3g10040 820165 transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA S.X. H.G.
0.59 74.7 At2g16060 816103 AHB1 (ARABIDOPSIS HEMOGLOBIN 1) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. S.X. H.G.
0.59 74.7 At5g15120 831364 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
138.5 99.9 GSM245477 2 hr Hypoxia Stress Total RNA Rep 2 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
125.9 99.9 GSM245492 2 hr Hypoxia Stress IP RNA Rep 3 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
124.1 99.9 GSM245487 2 hr Hypoxia Stress Total RNA Rep 3 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
118.4 99.9 GSM245467 2 hr Hypoxia Stress Total RNA Rep 1 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
116.4 99.9 GSM206278 Wild type, water treatment, biological rep2 GSE8319 A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis
114.5 99.9 GSM206279 Wild type, water treatment, biological rep3 GSE8319 A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis
113.8 99.9 GSM245482 2 hr Hypoxia Stress IP RNA Rep 2 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
101.4 99.9 GSM245472 2 hr Hypoxia Stress IP RNA Rep 1 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
83.4 99.9 GSM206277 Wild type, water treatment, biological rep1 GSE8319 A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis
79.5 99.9 GSM245484 9 hr Hypoxia Stress IP RNA Rep 2 GSE9719 Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.25 3e-18 93 At1g72820 843613 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO C.G. S.X.
0.02 1e-1 38 At5g08240 830720 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB C.G. S.X.
0.02 1e-1 38 At2g30933 3767975 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO C.G. S.X.
0.02 1e-1 38 At2g28650 817414 ATEXO70H8 (exocyst subunit EXO70 family protein H8) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. C.G. S.X.
0.02 1e-1 38 At1g12490 837806 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.03 1e-1 38 At1g12830 837839 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 1e-11 71 Glycine max GmaAffx.40962.1.S1_at BQ628146 - - 7e-12 At5g26200 mitochondrial substrate carrier family protein C.G. S.X.
0.03 1e+0 34 Hordeum vulgare HF21N04r_at HF21N04r - - 2e+0 At4g19150 ankyrin repeat family protein C.G. S.X.
0.05 2e-2 42 Oryza sativa Os03g0175200 9631.m00726 - Mitochondrial carrier protein family protein 1e-2 At5g26200 mitochondrial substrate carrier family protein C.G. S.X.
0.28 2e-19 97 Populus trichocarpa PtpAffx.22200.2.S1_at CV241652 hypothetical protein - 2e-19 At5g26200 mitochondrial substrate carrier family protein C.G. S.X.
0.04 3e-2 40 Triticum aestivum TaAffx.83023.1.S1_at CA663028 - - 2e-2 At5g26200 mitochondrial substrate carrier family protein C.G. S.X.
0.14 4e-11 67 Vitis vinifera 1615065_at CB982897 similar to mitochondrial substrate carrier family protein - 7e-28 At1g72820 mitochondrial substrate carrier family protein C.G. S.X.
0.02 9e-1 34 Zea mays Zm.13574.1.A1_at AY107909.1 - - 2e-12 At3g17420 GPK1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
C GO:0006839 Transport of substances into, out of or within a mitochondrion.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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