Gene omics information

Query gene ID At5g25910
Gene name AtRLP52 (Receptor Like Protein 52)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8190.4At5g25910832660AtRLP52 (Receptor Like Protein 52)putative disease resistance protein induced by chitin oligomers.S.X.H.G.
0.5773.8At5g43120834329tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
0.5469.5At5g57650835870eukaryotic translation initiation factor-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5469.5At2g34230817984-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.5267.4At5g07310830622AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.S.X.H.G.
0.4963.5At4g30710829194unknown proteinF:unknown;P:biological_process unknown;C:unknown;OMFBPVS.X.H.G.
0.4862.5At1g01150839294DNA binding / protein binding / zinc ion bindingF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription;C:unknown;PMOS.X.H.G.
0.4862.5At1g62590842556pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAS.X.H.G.
0.4659.8At2g07691815367unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4558.3At4g03160828054-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
304.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
273.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
266.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
260.8100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
248.7100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
243.6100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
235.6100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
225.3100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.3100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
206.8100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.3901126At5g25930832662leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVAC.G.S.X.
0.293e-84313At2g15080815997AtRLP19 (Receptor Like Protein 19)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.248e-82305At3g05660819733AtRLP33 (Receptor Like Protein 33)F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAVC.G.S.X.
0.241e-71272At3g05650819732AtRLP32 (Receptor Like Protein 32)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.284e-62240At3g28890822523AtRLP43 (Receptor Like Protein 43)F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAVC.G.S.X.
0.262e-57224At3g11080820279AtRLP35 (Receptor Like Protein 35)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAVC.G.S.X.
0.276e-55216At3g11010820272AtRLP34 (Receptor Like Protein 34)F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAVC.G.S.X.
0.242e-51204At5g27060832764AtRLP53 (Receptor Like Protein 53)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Glycine maxPsAffx.CL55Contig1_atPsAffx.CL55Contig1--4e-7At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.016e-136Hordeum vulgareHF05G20r_atHF05G20r--8e-1At3g19850phototropic-responsive NPH3 family proteinC.G.S.X.
0.016e-138Oryza sativaOs01g0946200AK071060.1--2e+0At2g01554unknown proteinC.G.S.X.
0.023e-242Populus trichocarpaPtpAffx.218451.1.S1_s_atpmrna34073hypothetical protein-2e+0At5g66320zinc finger (GATA type) family proteinC.G.S.X.
0.015e-344Triticum aestivumTaAffx.23792.1.S1_atCA730390--2e-2At4g33160ubiquitin-protein ligaseC.G.S.X.
0.011e+034Vitis vinifera1615876_atCF513558hypothetical protein LOC100248980-4e-12At4g37210tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.012e+034Zea maysZm.7056.6.A1_atCF051906RWD domain-containing protein 1-1e-2At3g52550-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
SGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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