Gene omics information

Query gene ID At5g25460
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At5g25460832620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBS.X.H.G.
0.135.8At2g47930819405AGP26 (ARABINOGALACTAN PROTEIN 26)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OPMVBFAS.X.H.G.
0.124.9At3g12610820441DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100)Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.S.X.H.G.
0.082.3At2g06850815247EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE)endoxyloglucan transferase (EXGT-A1) geneS.X.H.G.
0.040.9At3g20820821630leucine-rich repeat family proteinF:protein binding;P:signal transduction, defense response;C:apoplast, cell wall, chloroplast, membrane;PMOBFAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.6GSM133316RIKEN-LI3BGSE5701AtGenExpress: Basic hormone treatment of seeds
16.599.5GSM133318RIKEN-LI4BGSE5701AtGenExpress: Basic hormone treatment of seeds
15.999.5GSM133314RIKEN-LI2BGSE5701AtGenExpress: Basic hormone treatment of seeds
14.999.4GSM133312RIKEN-LI1BGSE5701AtGenExpress: Basic hormone treatment of seeds
14.599.4GSM133322RIKEN-LI6BGSE5701AtGenExpress: Basic hormone treatment of seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.743e-132472At5g11420831013-F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PC.G.S.X.
0.323e-27123At4g32460829381-F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBC.G.S.X.
0.056e-446At1g80240844364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBC.G.S.X.
0.054e-240At3g08030819994unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cell wall;PBC.G.S.X.
0.021e-138At1g29980839877-F:unknown;P:biological_process unknown;C:plasma membrane, anchored to membrane;PBC.G.S.X.
0.045e-136At2g34510818014-F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.181e-552Glycine maxGma.12342.3.S1_atBQ081225--1e-5At5g25460unknown proteinC.G.S.X.
0.024e-342Hordeum vulgareContig10884_atContig10884--3e-3At5g17510unknown proteinC.G.S.X.
0.027e-240Oryza sativaOs01g0772200AK060471.1-The start codon is not identified.7e-4At1g75510transcription initiation factor IIF beta subunit (TFIIF-beta) family proteinC.G.S.X.
0.183e-963Populus trichocarpaPtp.5205.1.S1_atBU888886hypothetical protein-3e-9At5g25460unknown proteinC.G.S.X.
0.026e-136Triticum aestivumTa.27499.1.A1_atBT009322.1--1e+1At5g03550-C.G.S.X.
0.037e-754Vitis vinifera1619831_a_atBQ794924hypothetical protein LOC100252479-6e-10At4g32460-C.G.S.X.
0.039e-134Zea maysZm.17666.1.A1_atCF635462hypothetical protein LOC100272483-2e+0At5g25460unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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