CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g25450

Gene name ubiquinol-cytochrome C reductase complex 14 kDa protein, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.77 88.0 At5g25450 832619 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO S.X. H.G.
0.95 97.0 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM S.X. H.G.
0.91 95.6 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. S.X. H.G.
0.91 95.6 At2g20560 816578 DNAJ heat shock family protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV S.X. H.G.
0.91 95.6 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. S.X. H.G.
0.89 94.6 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM S.X. H.G.
0.89 94.6 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM S.X. H.G.
0.89 94.6 At2g46240 819232 BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. S.X. H.G.
0.88 94.0 At4g12400 826849 stress-inducible protein, putative F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV S.X. H.G.
0.88 94.0 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
135.5 99.9 E-MEXP-98-raw-cel-320188969
133.2 99.9 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
128.7 99.9 E-MEXP-98-raw-cel-320188914
126.7 99.9 GSM131454 AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
125.0 99.9 GSM131449 AtGen_6-9221_Heatstress-Roots-1.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
122.8 99.9 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
121.8 99.9 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
121.8 99.9 E-MEXP-1725-raw-cel-1669614634
116.2 99.9 GSM131447 AtGen_6-9211_Heatstress-Shoots-1.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
108.1 99.9 GSM131450 AtGen_6-9222_Heatstress-Roots-1.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.39 8e-10 63 At4g32470 829382 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane;MPFO C.G. S.X.
0.01 7e-1 34 At1g71220 843462 EBS1 (EMS-mutagenized bri1 suppressor 1) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity;P:carbohydrate biosynthetic process, protein amino acid glycosylation;C:endoplasmic reticulum;MFOBP C.G. S.X.
0.01 3e+0 32 At5g44790 834509 RAN1 (RESPONSIVE-TO-ANTAGONIST 1) ATP dependent copper transporter vital for ethylene response pathway C.G. S.X.
0.01 3e+0 32 At5g13550 831199 SULTR4 Encodes a sulfate transporter. C.G. S.X.
0.02 3e+0 32 At5g40510 834049 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FBPOA C.G. S.X.
0.02 3e+0 32 At4g27680 828882 MSP1 protein, putative / intramitochondrial sorting protein, putative F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OBMFPAV C.G. S.X.
0.02 3e+0 32 At4g33490 829486 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;POMF C.G. S.X.
0.03 3e+0 32 At4g27320 828840 universal stress protein (USP) family protein Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase. C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 4e-9 61 Glycine max GmaAffx.93477.1.S1_at CF809202 - - 4e-6 At4g32470 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.05 3e-1 34 Hordeum vulgare HT08O05u_at HT08O05u - - 7e-1 At5g25450 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.04 2e-2 40 Oryza sativa Os.8870.1.S1_s_at - - - 0 C.G. S.X.
0.35 1e-15 83 Populus trichocarpa PtpAffx.5384.2.A1_x_at CV247257 hypothetical protein - 2e-15 At5g25450 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.04 7e-1 34 Triticum aestivum TaAffx.23673.1.S1_at CA732013 - - 4e+0 At1g21720 PBC1 (PROTEASOME BETA SUBUNIT C1) C.G. S.X.
0.20 3e-6 50 Vitis vinifera 1615254_at CB349010 hypothetical protein LOC100257612 - 6e-6 At4g32470 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.16 5e-3 40 Zea mays Zm.8375.1.A1_at BM080176 - - 2e-2 At5g25450 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006122 The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00190 Oxidative phosphorylation
01100 Metabolic pathways
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