CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g25180

Gene name CYP71B14

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.41 52.4 At5g25180 832589 CYP71B14 putative cytochrome P450 S.X. H.G.
0.69 82.9 At5g04010 830280 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.69 82.9 At4g26050 828711 leucine-rich repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPBOFAV S.X. H.G.
0.69 82.9 At5g66430 836775 S-adenosyl-L-methionine:carboxyl methyltransferase family protein F:S-adenosyl-Lmethionine:benzoic acid acid carboxyl methyl transferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF S.X. H.G.
0.64 78.9 At5g18450 831963 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. S.X. H.G.
0.64 78.9 At5g65550 836681 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF S.X. H.G.
0.63 78.1 At5g57790 835888 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.61 76.7 At3g16120 820857 dynein light chain, putative F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF S.X. H.G.
0.60 75.7 At1g12130 837765 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOMFPA S.X. H.G.
0.51 66.3 At4g02690 828203 glutamate binding F:glutamate binding;P:unknown;C:unknown;BOMPFV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
400.6 100.0 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds
333.1 100.0 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
270.6 100.0 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
141.2 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
73.8 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
70.5 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
68.8 99.9 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
68.3 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
67.4 99.8 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
64.8 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.85 0 1400 At5g25140 832585 CYP71B13 putative cytochrome P450 C.G. S.X.
0.83 0 1346 At5g25130 832584 CYP71B12 putative cytochrome P450 C.G. S.X.
0.83 0 1322 At5g25120 832583 CYP71B11 putative cytochrome P450 C.G. S.X.
0.04 8e-4 46 At5g57260 835831 CYP71B10 putative cytochrome P450 C.G. S.X.
0.02 3e-3 44 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. C.G. S.X.
0.06 3e-3 44 At3g26290 822232 CYP71B26 putative cytochrome P450 C.G. S.X.
0.02 1e-2 42 At4g15330 827199 CYP705A1 a member of the cytochrome P450 family C.G. S.X.
0.02 1e-2 42 At3g26210 822222 CYP71B23 putative cytochrome P450 C.G. S.X.
0.04 5e-2 40 At3g26310 822235 CYP71B35 putative cytochrome P450 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Glycine max GmaAffx.8278.2.S1_at BG046151 - - 4e-6 At1g27520 glycoside hydrolase family 47 protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig19640_at Contig19640 - - 6e-2 At2g25260 unknown protein C.G. S.X.
0.06 2e-2 42 Oryza sativa Os02g0184700 9630.m00833 - Cytochrome P450 family protein 1e-2 At5g25180 CYP71B14 C.G. S.X.
0.04 4e-3 44 Populus trichocarpa PtpAffx.213125.1.S1_at pmrna25687 hypothetical protein - 1e-3 At5g25180 CYP71B14 C.G. S.X.
0.02 2e-1 38 Triticum aestivum Ta.9088.3.S1_at CA618752 - - 7e-2 At2g20784 unknown protein C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1607359_s_at BQ797168 hypothetical protein LOC100247960 /// hypothetical protein LOC100253084 /// hypothetical protein LOC100256782 - 1e+0 At5g51845 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.11854.1.A1_at BM381252 - - 4e+0 At5g22545 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00903 Limonene and pinene degradation
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
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