Gene omics information

Query gene ID At5g25160
Gene name ZFP3 (ZINC FINGER PROTEIN 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5873.8At5g25160832587ZFP3 (ZINC FINGER PROTEIN 3)Encodes a zinc finger protein containing only a single zinc finger.S.X.H.G.
0.5974.7At5g43180834336unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOS.X.H.G.
0.5773.8At1g31060839992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.5267.4At3g23430821924PHO1 (phosphate 1)mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.S.X.H.G.
0.5065.3At1g67710843096ARR11 (RESPONSE REGULATOR 11)Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.S.X.H.G.
0.4862.5At3g62040825377catalytic/ hydrolaseF:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFAS.X.H.G.
0.4355.3At2g308408176352-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseS.X.H.G.
0.3643.6At4g33420829479peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;PFOBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
111.399.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
96.699.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
93.699.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
85.099.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
61.899.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
59.999.8GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
48.399.8E-MEXP-1474-raw-cel-1593932705
45.799.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
42.799.8E-MEXP-1474-raw-cel-1593932609
41.299.8E-MEXP-1474-raw-cel-1593932673
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.262e-27123At5g10970830964zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PC.G.S.X.
0.104e-1065At5g57520835856ZFP2 (ZINC FINGER PROTEIN 2)Encodes a zinc finger protein containing only a single zinc finger.C.G.S.X.
0.072e-963At1g24625839077ZFP7 (ZINC FINGER PROTEIN 7)Encodes a zinc finger protein containing only a single zinc finger.C.G.S.X.
0.071e-757At1g80730844412ZFP1 (ZINC-FINGER PROTEIN 1)Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation.C.G.S.X.
0.054e-756At1g66140842928ZFP4 (ZINC FINGER PROTEIN 4)Encodes a zinc finger protein containing only a single zinc finger.C.G.S.X.
0.062e-654At1g67030843022ZFP6 (ZINC FINGER PROTEIN 6)Encodes a zinc finger protein containing only a single zinc finger.C.G.S.X.
0.054e-446At1g68360843165zinc finger protein-relatedF:transcription factor activity;P:regulation of transcription;C:intracellular;PMOC.G.S.X.
0.012e-240At5g60280836150lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.039e-238At5g61470836268zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-1271Glycine maxGmaAffx.13148.1.S1_atBF596896--9e-10At5g57520ZFP2 (ZINC FINGER PROTEIN 2)C.G.S.X.
0.031e+130Hordeum vulgareHVSMEi0002M03r2_atHVSMEi0002M03r2--2e-1At5g58412-C.G.S.X.
0.047e-136Oryza sativaOsAffx.8903.1.S1_at---0C.G.S.X.
0.169e-1581Populus trichocarpaPtpAffx.64108.1.S1_atCV260563hypothetical protein-7e-15At5g25160ZFP3 (ZINC FINGER PROTEIN 3)C.G.S.X.
0.046e+032Triticum aestivumTaAffx.7901.1.S1_atCA644971--4e+0At5g25160ZFP3 (ZINC FINGER PROTEIN 3)C.G.S.X.
0.044e-134Vitis vinifera1608199_atCF513420hypothetical protein LOC100264703-9e-3At1g66140ZFP4 (ZINC FINGER PROTEIN 4)C.G.S.X.
0.039e+030Zea maysZmAffx.671.1.A1_atAI734431--3e+0At3g50810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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