Gene omics information

Query gene ID At5g24430
Gene name calcium-dependent protein kinase, putative / CDPK, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At5g24430832514calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVAS.X.H.G.
0.5065.3At5g41800834185amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;PMFOS.X.H.G.
0.3133.8At2g39660818549BIK1 (BOTRYTIS-INDUCED KINASE1)Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.S.X.H.G.
0.168.8At3g02880821198leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall;PMOBFVAS.X.H.G.
0.092.8At5g43190834337F-box family protein (FBX6)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;PFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
78.899.9E-MEXP-1443-raw-cel-1581869921
58.799.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
45.899.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responses
37.499.7GSM270866Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1
35.299.7GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
34.999.7GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
33.499.7GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
33.499.7GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
31.999.7GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
30.999.7GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8001213At3g49370824099calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.086e-1169At3g50530824217CRK (CDPK-related kinase)CDPK-related kinaseC.G.S.X.
0.134e-963At2g46700819282calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVAC.G.S.X.
0.036e-550At4g21940828283CPK15member of Calcium Dependent Protein KinaseC.G.S.X.
0.022e-448At4g36070829763CPK18member of Calcium Dependent Protein KinaseC.G.S.X.
0.022e-448At2g17290816235CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.C.G.S.X.
0.032e-448At2g17890816299CPK16member of Calcium Dependent Protein KinaseC.G.S.X.
0.024e-344At4g23650828465CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family.C.G.S.X.
0.011e-242At2g38910818476CPK20member of Calcium Dependent Protein KinaseC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-965Glycine maxGma.17975.2.S1_atBQ628976--2e-29At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.041e-138Hordeum vulgareContig11154_atContig11154--1e-15At5g66210CPK28C.G.S.X.
0.118e-1273Oryza sativaOs.20211.1.S1_at---0C.G.S.X.
0.282e-1895Populus trichocarpaPtpAffx.210312.1.S1_atpmrna20295CPK related kinase 4-1e-18At5g24430calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.092e-757Triticum aestivumTaAffx.64084.1.S1_atBJ316057--7e-5At2g41140CRK1 (CDPK-RELATED KINASE 1)C.G.S.X.
0.261e-24113Vitis vinifera1610570_atCA807939hypothetical protein LOC100246879-2e-24At5g24430calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.124e-1065Zea maysZm.42.1.S1_atD84508.1CDPK-related protein kinase-9e-17At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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