Gene omics information

Query gene ID At5g24110
Gene name WRKY30
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
1.00100.0At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
1.00100.0At1g22810838887AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
0.8994.6At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.8994.6At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
146.899.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
138.299.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
122.099.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-240At2g15240816013UNC-50 family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MFPOC.G.S.X.
0.031e-138At3g54430824609SRS6 (SHI-RELATED SEQUENCE 6)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.C.G.S.X.
0.021e-138At3g03330821281short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endoplasmic reticulum, plasma membrane;BOMFPAVC.G.S.X.
0.051e-138At3g01970821270WRKY45member of WRKY Transcription Factor; Group IC.G.S.X.
0.021e-138At2g37260818303TTG2 (TRANSPARENT TESTA GLABRA 2)Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.C.G.S.X.
0.021e-138At1g06560837167NOL1/NOP2/sun family proteinF:RNA binding;P:biological_process unknown;C:cellular_component unknown;BOMAFPC.G.S.X.
0.014e-136At5g23630832428ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy proteinA novel member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-1273Glycine maxGmaAffx.86377.1.S1_atBG406476WRKY55 protein-2e-12At5g24110WRKY30C.G.S.X.
0.036e-548Hordeum vulgareContig12005_atContig12005--2e-4At5g24110WRKY30C.G.S.X.
0.042e-757Oryza sativaOs06g01581009634.m00564-WRKY transcription factor 632e-7At5g24110WRKY30C.G.S.X.
0.077e-1065Populus trichocarpaPtpAffx.210225.1.S1_atpmrna20137hypothetical protein-4e-2At4g11070WRKY41C.G.S.X.
0.048e-342Triticum aestivumTaAffx.91377.1.S1_atBJ322852WRKY3 transcription factor-3e-8At2g44745WRKY family transcription factorC.G.S.X.
0.039e-340Vitis vinifera1609130_atBQ799620hypothetical protein LOC100260212-2e-21At5g49520WRKY48C.G.S.X.
0.043e-652Zea maysZm.18098.1.A1_atCK347304--7e-6At5g24110WRKY30C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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