Gene omics information

Query gene ID At5g24030
Gene name SLAH3 (SLAC1 HOMOLOGUE 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g24030832468SLAH3 (SLAC1 HOMOLOGUE 3)Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.S.X.H.G.
0.3338.1At1g72790843610hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MPFOBVAS.X.H.G.
0.2522.6At4g18010827526AT5PTASE2 (MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2)Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.S.X.H.G.
0.2014.4At1g35350840424-F:unknown;P:unknown;C:integral to membrane;FMPOBS.X.H.G.
0.1710.2At2g31010817652protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
188.3100.0E-MEXP-98-raw-cel-320188804
178.6100.0E-MEXP-98-raw-cel-320189024
147.399.9E-MEXP-98-raw-cel-320188859
122.399.9E-MEXP-98-raw-cel-320189079
94.799.9GSM216896ga1-3_shoots_1h_water_repl4GSE8739Early gibberellin responses in Arabidopsis
76.899.9GSM216906ga1-3_shoots_1h_GA4_repl4GSE8739Early gibberellin responses in Arabidopsis
73.399.9GSM216895ga1-3_shoots_1h_water_repl3GSE8739Early gibberellin responses in Arabidopsis
70.699.9GSM216904ga1-3_shoots_1h_GA4_repl3GSE8739Early gibberellin responses in Arabidopsis
63.799.8GSM142613DV001_ATH1_A8-degra-EghGSE6150Gibberellin and ethylene cross-talk at the level of transcriptional regulation in Arabidopsis.
54.599.8GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.141e-965At4g27970828910SLAH2 (SLAC1 HOMOLOGUE 2)Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane.C.G.S.X.
0.012e-138At5g06730830562peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBMC.G.S.X.
0.019e-136At5g41080834110glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.019e-136At1g21810838784-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.014e+034At5g23000832364MYB37 (MYB DOMAIN PROTEIN 37)"Putative homolog of the Blind gene in tomato. Together with RAX2 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB37, regulates axillary meristem formation. RAX1 is expressed in a small central domain within the boundary zone separating SAM and leaf primordia during early leaf primordium development and is currently the earliest spatial marker for future axillary meristems. Member of the R2R3 factor gene family."C.G.S.X.
0.014e+034At5g20810832204auxin-responsive protein, putative / small auxin up RNA (SAUR_B)F:calmodulin binding;P:response to auxin stimulus;C:peroxisome;POC.G.S.X.
0.024e+034At5g10160830880beta-hydroxyacyl-ACP dehydratase, putativeF:hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast, membrane;BOPMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-656Glycine maxGma.17671.1.S1_atCA820135--3e-7At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.027e+032Hordeum vulgareContig408_atContig408--1e+0At1g03600photosystem II family proteinC.G.S.X.
0.135e-448Oryza sativaOs05g0219900AK120886.1-Conserved hypothetical protein3e-4At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.096e-654Populus trichocarpaPtp.3718.1.S1_atDN491471--2e-6At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.071e-656Triticum aestivumTaAffx.65288.1.A1_atBJ252359--3e-7At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.013e-136Vitis vinifera1613294_atCD005027--1e+0At2g29180unknown proteinC.G.S.X.
0.062e-344Zea maysZm.18455.1.A1_atCO531054C4-dicarboxylate transporter/malic acid transport protein-2e-3At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006873Any process involved in the maintenance of an internal equilibrium of ions at the level of a cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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