CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g23270

Gene name STP11 (SUGAR TRANSPORTER 11)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g23270 832391 STP11 (SUGAR TRANSPORTER 11) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA S.X. H.G.
0.91 95.6 At3g09530 820110 ATEXO70H3 (exocyst subunit EXO70 family protein H3) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. S.X. H.G.
0.90 95.1 At2g18470 816362 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVA S.X. H.G.
0.88 94.0 At2g27180 817260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.87 93.5 At1g04470 839512 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB S.X. H.G.
0.87 93.5 At3g54800 824645 pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein F:phosphoinositide binding;P:signal transduction;C:unknown;POM S.X. H.G.
0.87 93.5 At4g36490 829801 SFH12 (SEC14-LIKE 12) F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:unknown;MPFO S.X. H.G.
0.87 93.5 At1g18990 838480 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOPFBVA S.X. H.G.
0.86 93.1 At1g14420 838004 AT59 F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFO S.X. H.G.
0.86 93.1 At2g31500 817708 CPK24 member of Calcium Dependent Protein Kinase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
201.9 100.0 E-ATMX-35-raw-cel-1574334880
191.3 100.0 E-ATMX-35-raw-cel-1574334864
183.6 100.0 E-MEXP-285-raw-cel-440782725
173.5 100.0 E-MEXP-285-raw-cel-440782791
148.6 99.9 E-MEXP-1138-raw-cel-1432773002
147.5 99.9 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
130.1 99.9 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
126.0 99.9 GSM154503 Arabidopsis desiccated mature pollen grains rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
124.0 99.9 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
122.7 99.9 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.25 1e-51 204 At3g19940 821532 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.31 3e-37 157 At1g50310 841453 STP9 (SUGAR TRANSPORTER 9) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.18 2e-26 121 At3g19930 821531 STP4 (SUGAR TRANSPORTER 4) Encodes a sucrose hydrogen symporter that is induced by wounding. C.G. S.X.
0.10 2e-7 57 At4g21480 828233 carbohydrate transmembrane transporter/ sugar:hydrogen symporter F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAV C.G. S.X.
0.03 3e-6 54 At5g61520 836273 hexose transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.14 1e-5 52 At1g11260 837667 STP1 (SUGAR TRANSPORTER 1) Encodes a H+/hexose cotransporter. C.G. S.X.
0.03 5e-5 50 At1g07340 837245 ATSTP2 (SUGAR TRANSPORTER 2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOA C.G. S.X.
0.04 8e-4 46 At4g02050 828154 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BFMPOA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-10 67 Glycine max Gma.1202.1.S1_at AJ563365.1 monosaccharide transporter - 3e-22 At4g21480 carbohydrate transmembrane transporter/ sugar:hydrogen symporter C.G. S.X.
0.05 4e-1 36 Hordeum vulgare Contig5537_at Contig5537 - - 1e-12 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.04 1e-1 40 Oryza sativa Os07g0131600 AK068296.1 - Monosaccharide transporter 3 4e-9 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.19 3e-13 77 Populus trichocarpa PtpAffx.224567.1.S1_s_at pmrna43218 hypothetical protein - 5e-42 At1g50310 STP9 (SUGAR TRANSPORTER 9) C.G. S.X.
0.04 8e-4 46 Triticum aestivum Ta.12517.1.S1_at CK163074 - - 1e-9 At1g50310 STP9 (SUGAR TRANSPORTER 9) C.G. S.X.
0.03 1e-12 73 Vitis vinifera 1616083_at CB009608 hypothetical protein LOC100263644 - 6e-39 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.04 1e-6 54 Zea mays ZmAffx.7.1.S1_at AY683004.1 monosaccharide transport protein 1 - 4e-9 At1g50310 STP9 (SUGAR TRANSPORTER 9) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
L GO:0055085 The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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