Gene omics information

Query gene ID At5g23240
Gene name DNAJ heat shock N-terminal domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g23240832388DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAVS.X.H.G.
0.4050.8At5g42900834301unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3338.1At3g07650819956COL9 (CONSTANS-LIKE 9)This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.S.X.H.G.
0.2522.6At1g07050837216CONSTANS-like protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFS.X.H.G.
0.020.4At1g68600843190unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.399.8GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
48.899.8GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
36.199.7E-ATMX-32-raw-cel-1562974409
34.299.7GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
31.599.7E-ATMX-32-raw-cel-1562974681
31.199.7E-ATMX-32-raw-cel-1562974621
30.899.7GSM133730Buchanan-Wollaston_A-2-bwoll-C5G_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
29.999.7GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
27.499.7GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
27.399.7GSM133734Buchanan-Wollaston_A-6-bwoll-NG2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-138At5g23420832408HMGB6Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.C.G.S.X.
0.017e-136At5g55920835690nucleolar protein, putativeF:S-adenosylmethionine-dependent methyltransferase activity, RNA binding;P:rRNA processing;C:nucleolus;BMOFPVAC.G.S.X.
0.027e-136At5g40120834009AGL76 (AGAMOUS-LIKE 76)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POBC.G.S.X.
0.017e-136At5g26710832718glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putativeF:glutamate-tRNA ligase activity;P:glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAPC.G.S.X.
0.017e-136At2g32560817817F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POC.G.S.X.
0.013e+034At5g47850834836CCR4 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 4)F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.013e+034At5g64930836617CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5)Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).C.G.S.X.
0.023e+034At5g24890832558unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBC.G.S.X.
0.023e+034At5g51580835232unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-344Glycine maxGmaAffx.67823.2.S1_atBG043066--1e-3At5g23240DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.025e+032Hordeum vulgareContig9249_atContig9249--1e+0At3g15110unknown proteinC.G.S.X.
0.021e+036Oryza sativaOs10g01320009638.m00330--2e-2At1g67195MIR414 (MICRORNA 414)C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.142632.1.A1_atCK087808--1e+0At1g74730unknown proteinC.G.S.X.
0.027e-136Triticum aestivumTaAffx.97823.1.S1_atBQ803106--4e+0At1g73602CPuORF32 (Conserved peptide upstream open reading frame 32)C.G.S.X.
0.028e-134Vitis vinifera1622246_atCF212159--2e-1At4g34800auxin-responsive family proteinC.G.S.X.
0.025e+032Zea maysZm.9686.1.A1_atBM335645--5e+0At5g01734unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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