Gene omics information

Query gene ID At5g23030
Gene name TET12 (TETRASPANIN12)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g23030832367TET12 (TETRASPANIN12)Member of TETRASPANIN familyS.X.H.G.
0.8391.4At1g18940838475nodulin family proteinF:unknown;P:unknown;C:endomembrane system;BPOFMAS.X.H.G.
0.7788.0At4g30560829179ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9)member of Cyclic nucleotide gated channel familyS.X.H.G.
0.7385.5At1g11100837651SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-relatedF:in 6 functions;P:unknown;C:unknown;MBFOPVAS.X.H.G.
0.7184.2At4g32440829379agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:unknown;PS.X.H.G.
0.7184.2At1g70590843396F-box family proteinF:binding;P:biological_process unknown;C:chloroplast;BOFMPVS.X.H.G.
0.7083.5At2g21930816729F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6882.2At5g05130830395SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinF:in 7 functions;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.6882.2At4g02730828189transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFOPBAVS.X.H.G.
0.6882.2At2g30580817608DRIP2 (DREB2A-INTERACTING PROTEIN 2)Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
284.6100.0E-ATMX-35-raw-cel-1574334800
258.9100.0E-ATMX-35-raw-cel-1574334832
253.6100.0E-ATMX-35-raw-cel-1574334816
232.5100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
171.5100.0GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
136.599.9GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
136.299.9GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
128.599.9GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
119.099.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
114.299.9GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-136At3g24840822082SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:transporter activity;P:transport;C:intracellular;MPFOC.G.S.X.
0.022e+034At5g60850836206OBP4Encodes a zinc finger protein.C.G.S.X.
0.012e+034At4g36210829778unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOBPAC.G.S.X.
0.012e+034At3g18290821357EMB2454 (embryo defective 2454)F:protein binding, zinc ion binding;P:embryonic development ending in seed dormancy;C:unknown;MPOFBVC.G.S.X.
0.022e+034At2g34010817962unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.032e+034At1g15230838090unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxHgAffx.23789.1.S1_s_atCB375467--3e-1At5g23030TET12 (TETRASPANIN12)C.G.S.X.
0.038e-134Hordeum vulgareM58754_atM58754--4e-1At3g05020ACP1 (acyl carrier protein 1)C.G.S.X.
0.033e+034Oryza sativaOs11g06233009639.m03735--1e-3At2g11910unknown proteinC.G.S.X.
0.031e-138Populus trichocarpaPtp.7401.1.A1_atDN486023--6e-2At5g23030TET12 (TETRASPANIN12)C.G.S.X.
0.034e-136Triticum aestivumTaAffx.24261.1.S1_atCA723138--2e+0At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)C.G.S.X.
0.022e+032Vitis vinifera1614509_atCF205971.1--5e-3At5g27200ACP5 (acyl carrier protein 5)C.G.S.X.
0.033e+032Zea maysZm.10869.1.S1_atBM074344--3e-1At3g07510unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007568The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage