Gene omics information

Query gene ID At5g22860
Gene name serine carboxypeptidase S28 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At5g22860832349serine carboxypeptidase S28 family proteinF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:endomembrane system;MOFPBS.X.H.G.
0.5065.3At1g57590842135carboxylesteraseF:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOBS.X.H.G.
0.4050.8At3g57680824937peptidase S41 family proteinF:serine-type peptidase activity, protein binding;P:proteolysis, intracellular signaling cascade;C:chloroplast thylakoid lumen, membrane;OBPMS.X.H.G.
0.4050.8At4g24000828500ATCSLG2encodes a protein similar to cellulose synthaseS.X.H.G.
0.3235.7At2g25625817103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
289.8100.0GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
278.6100.0GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
231.9100.0GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
130.099.9GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
122.699.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
105.999.9GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
94.299.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
93.499.9GSM133025BC181-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
92.899.9GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
89.899.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.104e-1583At3g28680822498prolylcarboxypeptidase-relatedF:serine-type peptidase activity;P:proteolysis;C:endomembrane system;MPOC.G.S.X.
0.083e-963At5g65760836705serine carboxypeptidase S28 family proteinF:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;MOFPBC.G.S.X.
0.068e-446At2g24280816963serine carboxypeptidase S28 family proteinF:serine-type peptidase activity, serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system, lysosome;MOFPBC.G.S.X.
0.012e-138At4g04500825780protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-138At4g09980826589EMB1691 (EMBRYO DEFECTIVE 1691)F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding;P:embryonic development ending in seed dormancy;C:unknown;MOBFPVAC.G.S.X.
0.017e-136At5g44760834505C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.017e-136At5g10420830906antiporter/ drug transporterF:drug transporter activity, antiporter activity;P:multidrug transport, ripening;C:membrane;BPOFMAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.067e-859Glycine maxGmaAffx.76078.1.S1_atCA938662--2e-8At5g22860serine carboxypeptidase S28 family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig20267_atContig20267--4e+0At5g42070unknown proteinC.G.S.X.
0.014e-138Oryza sativaOs04g0295500AK065384.1-Conserved hypothetical protein4e-1At1g65040protein binding / zinc ion bindingC.G.S.X.
0.093e-448Populus trichocarpaPtpAffx.225065.1.S1_atpmrna44149hypothetical protein-2e-4At5g22860serine carboxypeptidase S28 family proteinC.G.S.X.
0.035e-240Triticum aestivumTaAffx.77669.1.S1_atCA744460--7e-1At3g03220ATEXPA13 (ARABIDOPSIS THALIANA EXPANSIN A13)C.G.S.X.
0.024e-342Vitis vinifera1614626_atCF208834--1e-22At5g65760serine carboxypeptidase S28 family proteinC.G.S.X.
0.021e+034Zea maysZm.7908.1.A1_atBM080382--1e+0At3g10020unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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