Gene omics information

Query gene ID At5g22300
Gene name NIT4 (NITRILASE 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g22300832290NIT4 (NITRILASE 4)encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.S.X.H.G.
0.3133.8At4g27830828896BGLU10 (BETA GLUCOSIDASE 10)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFAS.X.H.G.
0.1710.2At5g51070835180ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)ATP-dependent Clp protease regulatory subunitS.X.H.G.
0.030.6At4g17840827507unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVS.X.H.G.
0.030.6At4g03410827932peroxisomal membrane protein-relatedF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MFPOS.X.H.G.
0.030.6At1g76520843985auxin efflux carrier family proteinF:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
150.899.9E-MEXP-1443-raw-cel-1581869573
99.499.9E-ATMX-32-raw-cel-1562974681
98.199.9E-MEXP-1443-raw-cel-1581869803
94.699.9E-MEXP-1443-raw-cel-1581869745
82.499.9E-MEXP-1443-raw-cel-1581869515
73.999.9GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
70.499.9E-MEXP-711-raw-cel-1563002768
69.299.9GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
68.699.9GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
67.899.9E-MEXP-807-raw-cel-1173272921
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.424e-48192At3g44300823555NIT2 (nitrilase 2)Encodes an enzyme that catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (nitrile aminohydrolase, EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. Mutants have reduced sensitivity to IAN and are sensitive to IAA. This enzyme likely participates in other non-auxin-related metabolic pathways.C.G.S.X.
0.383e-42173At3g44320823557NIT3 (NITRILASE 3)This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.C.G.S.X.
0.352e-37157At3g44310823556NIT1Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.C.G.S.X.
0.021e-138At4g03620825662myosin heavy chain-relatedF:molecular_function unknown;P:response to cyclopentenone;C:unknown;MOFBPAVC.G.S.X.
0.031e-138At2g02990814828RNS1 (RIBONUCLEASE 1)member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.C.G.S.X.
0.022e+034At4g34630829615unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.398e-41169Glycine maxGmaAffx.84679.1.S1_atAW279371--4e-41At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.161e-963Hordeum vulgareContig7733_atContig7733--3e-9At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.205e-1273Oryza sativaOs02g0635200AK069985.1-Nitrilase 24e-12At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.284e-24113Populus trichocarpaPtpAffx.14282.1.S1_atDN490949--4e-24At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.182e-654Triticum aestivumTa.3922.1.S1_atCD454673--3e-6At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.151e-1169Vitis vinifera1622360_atCB981283hypothetical protein LOC100243086-5e-11At5g22300NIT4 (NITRILASE 4)C.G.S.X.
0.134e-1581Zea maysZm.14611.1.S1_atAY156979.1nitrilase 1-2e-14At5g22300NIT4 (NITRILASE 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0019499The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.
XGO:0051410Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00380Link to KEGG PATHWAYTryptophan metabolism
00460Link to KEGG PATHWAYCyanoamino acid metabolism
00910Link to KEGG PATHWAYNitrogen metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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