Gene omics information

Query gene ID At5g22290
Gene name anac089 (Arabidopsis NAC domain containing protein 89)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g22290832289anac089 (Arabidopsis NAC domain containing protein 89)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.2726.2At4g30935829218WRKY32member of WRKY Transcription Factor; Group IS.X.H.G.
0.1811.4At3g56720824839unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAS.X.H.G.
0.146.8At5g03070831675IMPA-9 (IMPORTIN ALPHA ISOFORM 9)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.S.X.H.G.
0.135.8At4g03200828041catalyticF:catalytic activity;P:unknown;C:chloroplast;OBMAFPS.X.H.G.
0.135.8At5g51280835202DEAD-box protein abstrakt, putativeF:helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:unknown;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.124.9At2g45690819177SSE1 (SHRUNKEN SEED 1)Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.S.X.H.G.
0.092.8At5g49930835056emb1441 (embryo defective 1441)F:zinc ion binding, nucleic acid binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;OMBFAPVS.X.H.G.
0.071.9At5g03560831789nucleobase:cation symporterF:nucleobase:cation symporter activity;P:biological_process unknown;C:cellular_component unknown;BMFPOS.X.H.G.
0.061.4At4g22740828370glycine-rich proteinF:molecular_function unknown;P:unknown;C:plasma membrane;MPBOFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
116.999.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
91.599.9GSM134313Penfield_1-15_embryo-ABA_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
88.199.9GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
84.099.9GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
67.099.8GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
53.999.8GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
47.299.8GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
44.299.8GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
38.399.8GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
37.099.7GSM25316548h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.361e-88327At3g44290823554anac060 (Arabidopsis NAC domain containing protein 60)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.023e-240At5g04410830320NAC2NAC family member, hypothetical transcriptional regulatorC.G.S.X.
0.023e-240At5g22380832299anac090 (Arabidopsis NAC domain containing protein 90)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.023e-240At3g44350823560anac061 (Arabidopsis NAC domain containing protein 61)F:transcription factor activity;P:multicellular organismal development, response to chitin, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.043e-240At1g02230837630ANAC004 (Arabidopsis NAC domain containing protein 4)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PFOC.G.S.X.
0.043e-240At1g34180840317anac016 (Arabidopsis NAC domain containing protein 16)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PC.G.S.X.
0.011e-138At5g56680835769SYNC1Encodes a putative cytosolic asparaginyl-tRNA synthetase.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Glycine maxGmaAffx.83570.1.S1_atBU578922--2e-1At5g22290anac089 (Arabidopsis NAC domain containing protein 89)C.G.S.X.
0.022e-136Hordeum vulgareContig14073_atContig14073--5e-1At5g22290anac089 (Arabidopsis NAC domain containing protein 89)C.G.S.X.
0.021e+036Oryza sativaOs08g0562200AK099629.1-No apical meristem (NAM) protein domain containingprotein2e-2At5g04410NAC2C.G.S.X.
0.203e-1273Populus trichocarpaPtpAffx.204403.1.S1_atpmrna8651NAC domain protein, IPR003441-2e-12At5g22290anac089 (Arabidopsis NAC domain containing protein 89)C.G.S.X.
0.025e-136Triticum aestivumTa.961.2.S1_a_atCA642180WRKY40 transcription factor-4e+0At5g22520unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1607315_atCB918842--4e+0At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)C.G.S.X.
0.023e+032Zea maysZmAffx.1049.1.A1_atAI881801--8e-1At2g21690RNA-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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