Gene omics information

Query gene ID At5g22270
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At5g22270832287unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.4050.8At1g22890838896unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2930.3At2g39400818525hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOPMFVAS.X.H.G.
0.114.1At2g15960816091unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.103.4At1g25560839143TEM1 (TEMPRANILLO 1)Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
52.599.8GSM173446oxt6 mutant, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
41.499.8GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
36.199.7GSM258001Phloem exudate_3GSE10247Transcriptome analysis of the Arabidopsis phloem
35.399.7GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responses
34.499.7GSM173445oxt6 mutant, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
33.099.7GSM257998Phloem exudate_1GSE10247Transcriptome analysis of the Arabidopsis phloem
28.099.7GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responses
27.799.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
22.199.6GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responses
20.799.6GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responses
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-136At5g07480830640oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.015e-134At5g26860832744LON1 (LON PROTEASE 1)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.035e-134At4g24650828567ATIPT4AB061402 Arabidopsis thaliana AtIPT4 mRNA for cytokinin synthase, complete cdsC.G.S.X.
0.015e-134At3g04580819614EIN4 (ETHYLENE INSENSITIVE 4)Ethylene receptor, subfamily 2. Has serine kinase activity.C.G.S.X.
0.022e+032At5g45190834555cyclin family proteinEncodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).C.G.S.X.
0.012e+032At5g55920835690nucleolar protein, putativeF:S-adenosylmethionine-dependent methyltransferase activity, RNA binding;P:rRNA processing;C:nucleolus;BMOFPVAC.G.S.X.
0.022e+032At5g54610835550ANK (ankyrin)Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.C.G.S.X.
0.022e+032At5g04630830340CYP77A9member of CYP77AC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-134Glycine maxGmaAffx.92891.1.S1_atCF806885--5e-40At2g01290ribose-5-phosphate isomeraseC.G.S.X.
0.074e+030Hordeum vulgareHY10A09u_atHY10A09u--4e+0At5g22270unknown proteinC.G.S.X.
0.051e+034Oryza sativaOs04g0530300AK062618.1-Conserved hypothetical protein1e+0At5g57370unknown proteinC.G.S.X.
0.067e-134Populus trichocarpaPtpAffx.82156.1.A1_s_atCV258427hypothetical protein-5e-1At5g22270unknown proteinC.G.S.X.
0.052e+032Triticum aestivumTaAffx.39333.1.A1_atBG908959--3e+0At5g67190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.056e-132Vitis vinifera1620759_atCD801484--6e-1At5g37474-C.G.S.X.
0.042e-134Zea maysZm.4836.1.A1_atBM078446fb14-2e-8At2g47690NADH-ubiquinone oxidoreductase-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage