Gene omics information

Query gene ID At5g21100
Gene name L-ascorbate oxidase, putative
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9797.6At5g21100832234L-ascorbate oxidase, putativeF:oxidoreductase activity, copper ion binding, L-ascorbate oxidase activity;P:oxidation reduction;C:plant-type cell wall;BFPMOAS.X.H.G.
0.5368.6At5g64940836618ATATH13Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.S.X.H.G.
0.5368.6At3g01180820294AtSS2 (starch synthase 2)F:transferase activity, transferring glycosyl groups;P:cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process;C:chloroplast;OPBMFAVS.X.H.G.
0.5267.4At3g02830821230ZFN1 (ZINC FINGER PROTEIN 1)Encodes a zinc finger protein.S.X.H.G.
0.4963.5At5g58870836004ftsh9 (FtsH protease 9)encodes an FtsH protease that is localized to the chloroplastS.X.H.G.
0.4862.5At3g05340819698pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFS.X.H.G.
0.4862.5At1g07010837211calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:peroxisome;OBPFAVS.X.H.G.
0.4761.2At2g26080817149AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2)F:glycine dehydrogenase (decarboxylating) activity, ATP binding;P:glycine decarboxylation via glycine cleavage system, glycine metabolic process;C:mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope;OBFAMPS.X.H.G.
0.4659.8At1g53090841743SPA4 (SPA1-RELATED 4)Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.S.X.H.G.
0.4659.8At3g10230820185LYC (LYCOPENE CYCLASE)Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
79.099.9GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
64.799.8GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
61.899.8GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
29.599.7GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
29.499.7GSM297382At.StarchSD.WTSS3.SS3R1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycle
25.599.7GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
24.099.6GSM131590ATGE_35_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
22.199.6GSM131630ATGE_58_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
22.199.6GSM131587ATGE_34_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
20.899.6GSM128718Pieterse_1-4_Control-72h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.454e-123442At5g21105832235L-ascorbate oxidase/ copper ion binding / oxidoreductaseF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:cell wall;BFPMOAC.G.S.X.
0.029e-446At1g18140838393LAC1 (Laccase 1)putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).C.G.S.X.
0.011e-242At5g01190831697LAC10 (laccase 10)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).C.G.S.X.
0.016e-240At5g05390830421LAC12 (laccase 12)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).C.G.S.X.
0.016e-240At2g42450818845lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:mitochondrion;FMPOBC.G.S.X.
0.012e-138At2g42270818828U5 small nuclear ribonucleoprotein helicase, putativeF:in 6 functions;P:unknown;C:unknown;BOMFAPVC.G.S.X.
0.029e-136At5g09360830795LAC14 (laccase 14)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).C.G.S.X.
0.019e-136At5g57140835820PAP28 (PURPLE ACID PHOSPHATASE 28)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOC.G.S.X.
0.019e-136At5g04670830344-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.065e-654Glycine maxGma.16213.1.S1_atBE658101--1e-11At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseC.G.S.X.
0.037e-342Hordeum vulgareHV_CEb0010P08r2_atHV_CEb0010P08r2--3e+0At3g46230ATHSP17.4C.G.S.X.
0.041e-140Oryza sativaOs06g0567900AB004799.1-L-ascorbate oxidase precursor (EC (ASO)4e-2At5g21100L-ascorbate oxidase, putativeC.G.S.X.
0.095e-654Populus trichocarpaPtpAffx.31354.1.A1_atCV238945hypothetical protein-2e-6At5g21100L-ascorbate oxidase, putativeC.G.S.X.
0.022e-138Triticum aestivumTa.1722.1.S1_atBE444189--2e+1Atmg00400-C.G.S.X.
0.051e-963Vitis vinifera1607223_atBQ796376hypothetical protein LOC100251280-4e-14At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseC.G.S.X.
0.016e+032Zea maysZm.8926.1.S1_atBE051229hypothetical protein LOC100192920-4e-1At4g15150glycine-rich proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0055114The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00053Link to KEGG PATHWAYAscorbate and aldarate metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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