Gene omics information

Query gene ID At5g20940
Gene name glycosyl hydrolase family 3 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At5g20940832219glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BOFPAMS.X.H.G.
0.4050.8At2g05910815143unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.4050.8At2g44260819034unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFMBOS.X.H.G.
0.3338.1At3g14630820691CYP72A9putative cytochrome P450S.X.H.G.
0.3133.8At1g62620842559flavin-containing monooxygenase family protein / FMO family proteinF:electron carrier activity, NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
856.6100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
463.5100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
324.5100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
233.3100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
120.699.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.599.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.399.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
118.799.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
116.699.9GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
116.499.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.571e-101371At5g20950832220glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall, membrane, plant-type cell wall;BOFPAMC.G.S.X.
0.085e-21103At5g04885830368glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:plasma membrane, anchored to membrane;BOFPAMC.G.S.X.
0.051e-656At3g47050823858glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:vacuole;BOFPAMC.G.S.X.
0.023e-448At3g47010823854hydrolase, hydrolyzing O-glycosyl compoundsF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMC.G.S.X.
0.051e-346At3g62710825445glycosyl hydrolase family 3 proteinF:xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BOFPAMC.G.S.X.
0.011e-242At3g27330822354zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPBVC.G.S.X.
0.026e-240At3g47000823853glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-1895Glycine maxGma.16696.1.S1_atBI971040beta-D-glucan exohydrolase-2e-44At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.194e-29129Hordeum vulgareContig3391_atContig3391--1e-28At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.151e-1379Oryza sativaOs03g0749300AK065044.1-Exoglucanase precursor3e-8At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.347e-24113Populus trichocarpaPtpAffx.207518.1.S1_atpmrna14929hypothetical protein-5e-24At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.143e-1997Triticum aestivumTa.9316.1.S1_x_atBJ237563beta-D-glucan exohydrolase-4e-19At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.142e-859Vitis vinifera1611747_atCF608890hypothetical protein LOC100246224-3e-8At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.169e-27121Zea maysZm.508.1.S1_atCA401738hypothetical protein LOC100191390-3e-26At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage