Gene omics information

Query gene ID At5g20810
Gene name auxin-responsive protein, putative / small auxin up RNA (SAUR_B)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g20810832204auxin-responsive protein, putative / small auxin up RNA (SAUR_B)F:calmodulin binding;P:response to auxin stimulus;C:peroxisome;POS.X.H.G.
0.5773.8At3g52080824371chx28 (cation/hydrogen exchanger 28)encodes a cation:proton exchanger expressed in pollenS.X.H.G.
0.2115.8At5g36260833623aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOS.X.H.G.
0.2014.4At3g56960824863PIP5K4 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4)Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.S.X.H.G.
0.1710.2At1g09600837487protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
409.9100.0E-MEXP-1138-raw-cel-1432773322
380.3100.0E-MEXP-1138-raw-cel-1432773290
337.7100.0E-MEXP-1138-raw-cel-1432773258
230.8100.0GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
208.7100.0E-MEXP-1138-raw-cel-1432773066
175.9100.0E-MEXP-1138-raw-cel-1432773034
155.199.9E-ATMX-35-raw-cel-1574334864
137.799.9GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
114.599.9GSM131593ATGE_36_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
103.599.9GSM239254CaMV::DME stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.672e-48192At3g43120823371auxin-responsive protein-relatedF:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.072e-550At2g21210816658auxin-responsive protein, putativePutative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.C.G.S.X.
0.061e-344At4g38840830039auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus, response to cold;C:plasma membrane;POC.G.S.X.
0.044e-342At4g31320829259auxin-responsive protein, putative / small auxin up RNA (SAUR_C)F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.061e-240At1g75580843893auxin-responsive protein, putativeF:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.066e-238At5g18030831670auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POC.G.S.X.
0.056e-238At4g388256241125-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.056e-238At4g38820830037unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-1377Glycine maxGmaAffx.50809.1.S1_atBM093425--9e-10At3g43120auxin-responsive protein-relatedC.G.S.X.
0.037e+030Hordeum vulgareContig26110_atContig26110--3e+0At5g56452-C.G.S.X.
0.062e+034Oryza sativaOsAffx.13634.1.S1_at---0C.G.S.X.
0.232e-1893Populus trichocarpaPtpAffx.153010.2.A1_atCV266721--1e-18At5g20810auxin-responsive protein, putative / small auxin up RNA (SAUR_B)C.G.S.X.
0.052e+130Triticum aestivumTaAffx.81873.1.S1_atCA680730--2e-1At5g39820anac094 (Arabidopsis NAC domain containing protein 94)C.G.S.X.
0.042e-238Vitis vinifera1606566_atCF211641hypothetical protein LOC100252008-1e-12At4g38840auxin-responsive protein, putativeC.G.S.X.
0.031e-136Zea maysZm.18341.1.A1_atCA398444cysteine-type peptidase-4e-4At5g04250OTU-like cysteine protease family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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