Gene omics information

Query gene ID At5g20520
Gene name WAV2 (WAVY GROWTH 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9396.4At5g20520832174WAV2 (WAVY GROWTH 2)Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).S.X.H.G.
0.4457.2At1g02100837541leucine carboxyl methyltransferase family proteinF:methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;FMOPS.X.H.G.
0.3541.6At3g22440821815hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.3032.1At4g24520828554ATR1 (ARABIDOPSIS P450 REDUCTASE 1)Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.S.X.H.G.
0.2522.6At5g19330832053armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing proteinF:protein binding, binding;P:unknown;C:plasma membrane;MPOFVBAS.X.H.G.
0.2217.5At4g27000828808ATRBP45CF:RNA binding;P:unknown;C:unknown;MPFOBAVS.X.H.G.
0.2115.8At5g18110831929NCBP (NOVEL CAP-BINDING PROTEIN)F:RNA binding, translation initiation factor activity;P:translational initiation;C:cytoplasm;MOFPS.X.H.G.
0.2014.4At5g14240831274-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.399.7GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
22.799.6GSM142661MB002_ATH1_A1-Eland-ch1GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
21.699.6GSM142652MC002_ATH1_A10.3-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.599.6GSM142650MC002_ATH1_A10.1-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.299.6GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
18.299.5GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
17.799.5GSM142772AM002_ATH1_A7-MCCOR-GFBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
17.599.5GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
17.599.5GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
17.499.5GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At2g37520818328PHD finger family proteinF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPFOC.G.S.X.
0.015e-136At5g61970836318signal recognition particle-related / SRP-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBAC.G.S.X.
0.022e+034At5g17170831581ENH1 (enhancer of sos3-1)F:protein binding, electron carrier activity, metal ion binding;P:unknown;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;BPOC.G.S.X.
0.022e+034At5g57620835866MYB36 (myb domain protein 36)Encodes a putative transcription factor (MYB36).C.G.S.X.
0.012e+034At3g01180820294AtSS2 (starch synthase 2)F:transferase activity, transferring glycosyl groups;P:cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process;C:chloroplast;OPBMFAVC.G.S.X.
0.012e+034At3g32030822955terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POFC.G.S.X.
0.022e+034At2g41040818703methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMC.G.S.X.
0.022e+034At1g01410837547APUM22 (Arabidopsis Pumilio 22)F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.228e-22105Glycine maxGma.13971.1.S1_atCD412065--8e-22At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.166e-238Hordeum vulgareContig982_atContig982--2e-1At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.131e-242Oryza sativaOs07g0608300AK073927.1-Esterase/lipase/thioesterase domain containingprotein1e-2At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.403e-64246Populus trichocarpaPtpAffx.74614.3.S1_atCV270110--2e-64At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.111e-448Triticum aestivumTa.7422.3.S1_a_atCA593775--6e-5At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.042e+032Vitis vinifera1622319_atCD720399--1e+0At2g31957LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75)C.G.S.X.
0.151e-550Zea maysZm.12534.1.A1_atCF628471hypothetical protein LOC100192944-5e-5At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009415A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus.
XGO:0009638The movement of an organism, or part of an organism, in response to a light stimulus, usually toward or away from it.
XGO:0009958The orientation of plant parts towards gravity.
XGO:0048364The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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