CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g20150

Gene name SPX1 (SPX DOMAIN GENE 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.64 78.9 At5g20150 832137 SPX1 (SPX DOMAIN GENE 1) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA S.X. H.G.
0.92 96.0 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
0.92 96.0 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
0.92 96.0 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
0.92 96.0 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO S.X. H.G.
0.84 91.9 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. S.X. H.G.
0.80 89.8 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.76 87.4 At3g44520 - - - S.X. H.G.
0.75 86.9 At1g52940 841727 PAP5 (PURPLE ACID PHOSPHATASE 5) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA S.X. H.G.
0.73 85.5 At3g02040 821175 SRG3 (senescence-related gene 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
140.7 99.9 E-MEXP-1797-raw-cel-1669767958
134.2 99.9 E-MEXP-1797-raw-cel-1669768057
132.2 99.9 E-MEXP-1797-raw-cel-1669767940
123.3 99.9 E-MEXP-1797-raw-cel-1669767949
113.3 99.9 E-MEXP-1797-raw-cel-1669767985
110.0 99.9 E-MEXP-1797-raw-cel-1669768030
106.6 99.9 E-MEXP-1797-raw-cel-1669767976
104.1 99.9 E-MEXP-1797-raw-cel-1669768039
101.2 99.9 E-MEXP-1797-raw-cel-1669768075
100.6 99.9 E-MEXP-1797-raw-cel-1669768084
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.25 5e-19 95 At2g26660 817207 SPX2 (SPX DOMAIN GENE 2) F:molecular_function unknown;P:cellular response to phosphate starvation;C:nucleus;FMPOB C.G. S.X.
0.04 2e-2 40 At5g39240 833920 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 1e-1 38 At3g29060 822550 - F:unknown;P:unknown;C:integral to membrane;MFPOVBA C.G. S.X.
0.02 4e-1 36 At5g51670 835241 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;POB C.G. S.X.
0.01 4e-1 36 At3g14590 820685 - F:unknown;P:unknown;C:chloroplast;MPFOB C.G. S.X.
0.07 4e-1 36 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO C.G. S.X.
0.01 4e-1 36 At1g23400 838948 CAF2 Promotes the splicing of chloroplast group II introns. C.G. S.X.
0.01 4e-1 36 At1g12860 837843 SCRM2 (SCREAM 2) Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 4e-8 59 Glycine max GmaAffx.79990.1.S1_s_at AW164345 - - 2e-8 At5g20150 SPX1 (SPX DOMAIN GENE 1) C.G. S.X.
0.03 5e-8 57 Hordeum vulgare Contig450_at Contig450 - - 6e-4 At5g15330 SPX4 (SPX DOMAIN GENE 4) C.G. S.X.
0.19 6e-17 89 Oryza sativa Os06g0603600 AK063544.1 - Ids4-like protein 5e-17 At5g20150 SPX1 (SPX DOMAIN GENE 1) C.G. S.X.
0.36 3e-30 133 Populus trichocarpa PtpAffx.163910.1.S1_at CX658564 hypothetical protein - 3e-29 At5g20150 SPX1 (SPX DOMAIN GENE 1) C.G. S.X.
0.11 3e-11 69 Triticum aestivum TaAffx.104994.1.S1_at CA646532 - - 3e-8 At2g26660 SPX2 (SPX DOMAIN GENE 2) C.G. S.X.
0.14 1e-16 85 Vitis vinifera 1622876_at CF209501 hypothetical protein LOC100264658 - 2e-9 At2g26660 SPX2 (SPX DOMAIN GENE 2) C.G. S.X.
0.03 6e-1 34 Zea mays ZmAffx.429.1.A1_at AI676885 - - 8e-1 At5g20150 SPX1 (SPX DOMAIN GENE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0080040 Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.
X GO:0016036 A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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