Gene omics information

Query gene ID At5g19690
Gene name STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3032.1At5g19690832089STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditionsS.X.H.G.
0.7586.9At2g47470819360UNE5 (UNFERTILIZED EMBRYO SAC 5)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.S.X.H.G.
0.6781.6At5g10840830951endomembrane protein 70, putativeF:unknown;P:unknown;C:integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall;MPOFBS.X.H.G.
0.5773.8At2g32920817854ATPDIL2-3 (PDI-LIKE 2-3)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.S.X.H.G.
0.3235.7At2g21160816651translocon-associated protein alpha (TRAP alpha) family proteinF:unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, vacuole;MPFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.099.4GSM133979Birnbaum_1-9_StageII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
13.799.4GSM184833Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3GSE7639Expression analysis of root developmental zones after treatment with salt
12.999.3GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
12.899.3GSM265428Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.599.3GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.499.3GSM265429Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.299.2GSM184834Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4GSE7639Expression analysis of root developmental zones after treatment with salt
11.099.2GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
10.799.2GSM184902Arabidopsis, root cells, stele, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
10.699.2GSM265421Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.083e-448At1g34130840312STT3B (staurosporin and temperature sensitive 3-like b)Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.C.G.S.X.
0.017e-240At3g04580819614EIN4 (ETHYLENE INSENSITIVE 4)Ethylene receptor, subfamily 2. Has serine kinase activity.C.G.S.X.
0.013e-138At5g13110831150G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.C.G.S.X.
0.013e-138At5g46210834663CUL4 (CULLIN4)Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.C.G.S.X.
0.001e+036At4g02660828210WD-40 repeat family protein / beige-relatedF:binding;P:signal transduction;C:chloroplast;MBOFPAC.G.S.X.
0.011e+036At4g34400829590DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MOBFPVAC.G.S.X.
0.011e+036At3g51310824294VPS35C (VPS35 HOMOLOG C)Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.C.G.S.X.
0.011e+036At3g01970821270WRKY45member of WRKY Transcription Factor; Group IC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.325e-96353Glycine maxGma.6390.1.S1_atBE211757--2e-96At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.381e-79297Hordeum vulgareContig9420_atContig9420--1e-79At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.503e-80301Oryza sativaOs05g0519900AK070919.1-Oligosaccharyl transferase STT3 subunit1e-80At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.285e-47190Populus trichocarpaPtpAffx.54580.1.S1_atDN487058hypothetical protein-1e-47At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.291e-65252Triticum aestivumTa.9644.1.S1_atCA647791--7e-66At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.261e-84313Vitis vinifera1618013_atCF519167oligosaccharyl transferase STT3 protein-like-7e-77At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)C.G.S.X.
0.078e-652Zea maysZm.3652.1.A1_atCO529950--5e-79At1g34130STT3B (staurosporin and temperature sensitive 3-like b)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00510Link to KEGG PATHWAYN-Glycan biosynthesis
01100Link to KEGG PATHWAYMetabolic pathways
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