Gene omics information

Query gene ID At5g19500
Gene name tryptophan/tyrosine permease family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9296.0At5g19500832070tryptophan/tyrosine permease family proteinF:amine transmembrane transporter activity;P:amino acid transport;C:membrane;BOPAMFS.X.H.G.
0.5673.0At3g56160824782bile acid:sodium symporterF:bile acid:sodium symporter activity;P:sodium ion transport;C:chloroplast, chloroplast envelope;BOMPFAS.X.H.G.
0.5267.4At1g06240837134unknown proteinF:unknown;P:biological_process unknown;C:unknown;BOPFMS.X.H.G.
0.5065.3At4g05090825853inositol monophosphatase family proteinF:3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity;P:sulfur metabolic process;C:chloroplast;BOFPMAS.X.H.G.
0.4457.2At3g21580821712cobalt ion transmembrane transporterF:cobalt ion transmembrane transporter activity;P:cobalt ion transport, cobalamin biosynthetic process;C:chloroplast;BOPAS.X.H.G.
0.4253.9At5g06790830569unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.4050.8At1g29530839830unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBAS.X.H.G.
0.4050.8At1g49010841324myb family transcription factorF:transcription factor activity, DNA binding;P:in 6 processes;C:unknown;PMOFBVS.X.H.G.
0.3846.7At3g26630822275pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMS.X.H.G.
0.3745.0At3g22104821773phototropic-responsive NPH3 protein-relatedF:protein binding, signal transducer activity;P:response to light stimulus;C:unknown;PMOBFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
295.1100.0GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
76.699.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.099.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
27.699.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
17.099.5GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
16.199.5GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
15.499.5GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
15.099.4GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.899.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.799.3GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At5g10800830947RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.018e-136At4g33020829439ZIP9member of Fe(II) transporter isolog familyC.G.S.X.
0.023e+034At5g55460835639protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.023e+034At5g22990832363zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMOC.G.S.X.
0.013e+034At5g52570835334BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)Converts β-carotene to zeaxanthin via cryptoxanthin.C.G.S.X.
0.013e+034At4g33010829438AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)F:glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity;P:glycine catabolic process, glycine decarboxylation via glycine cleavage system;C:mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope;OBFAMPC.G.S.X.
0.013e+034At4g26660828773-F:unknown;P:biological_process unknown;C:chloroplast;MOFBPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.81457.1.S1_s_atBF596737--3e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.097e-1271Hordeum vulgareContig10597_atContig10597--2e-11At5g19500tryptophan/tyrosine permease family proteinC.G.S.X.
0.102e-656Oryza sativaOs07g0662800AK066067.1-Aromatic amino acid permease family protein1e-6At5g19500tryptophan/tyrosine permease family proteinC.G.S.X.
0.381e-24115Populus trichocarpaPtpAffx.200547.1.S1_atpmrna1085hypothetical protein-8e-25At5g19500tryptophan/tyrosine permease family proteinC.G.S.X.
0.092e-757Triticum aestivumTa.15656.1.A1_atCA486069--9e-8At5g19500tryptophan/tyrosine permease family proteinC.G.S.X.
0.024e+032Vitis vinifera1619739_atCB341962hypothetical protein LOC100265726-1e-3At2g39270adenylate kinase family proteinC.G.S.X.
0.025e+032Zea maysZm.6234.2.A1_atAI881460--8e-7At2g30110ATUBA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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