Gene omics information

Query gene ID At5g19460
Gene name atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At5g19460832066atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)F:hydrolase activity;P:biological_process unknown;C:chloroplast;BFOMPS.X.H.G.
0.8391.4At1g56650842120PAP1 (PRODUCTION OF ANTHOCYANIN PIGMENT 1)Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene.S.X.H.G.
0.8391.4At5g54060835489UF3GT (udp-glucose:flavonoid 3-O-glucosyltransferase)F:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation, response to sucrose stimulus;C:cellular_component unknown;PMBVFOS.X.H.G.
0.7385.5At1g034953766646transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFS.X.H.G.
0.7385.5At4g14090827046UDP-glucoronosyl/UDP-glucosyl transferase family proteinThe At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.S.X.H.G.
0.7184.2At4g22870828386leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeF:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
310.0100.0GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
277.7100.0GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
275.3100.0GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
256.6100.0GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
214.7100.0GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
213.0100.0GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
184.4100.0GSM269822T6 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
169.7100.0GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
146.199.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
145.799.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.750735At5g19470832067atnudt24 (Arabidopsis thaliana Nudix hydrolase homolog 24)F:hydrolase activity;P:biological_process unknown;C:chloroplast;BFOMPC.G.S.X.
0.021e-138At3g01800821076ribosome recycling factor family protein / ribosome releasing factor family proteinF:unknown;P:translation;C:mitochondrion;BOMPFC.G.S.X.
0.026e-136At5g54700835559ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBFC.G.S.X.
0.016e-136At3g13100820498ATMRP7member of MRP subfamilyC.G.S.X.
0.026e-136At3g17880821056ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.C.G.S.X.
0.026e-136At1g60280842323ANAC023 (Arabidopsis NAC domain containing protein 23)F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.026e-136At1g77610844096glucose-6-phosphate/phosphate translocator-relatedF:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBAC.G.S.X.
0.022e+034At5g49020834961PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A)Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.153e-963Glycine maxGmaAffx.32826.2.S1_atBM884960--1e-9At5g19460atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)C.G.S.X.
0.103e-1065Hordeum vulgareContig15947_atContig15947--3e-6At5g19470atnudt24 (Arabidopsis thaliana Nudix hydrolase homolog 24)C.G.S.X.
0.101e-346Oryza sativaOs09g0322200AK067539.1-NUDIX hydrolase domain containing protein8e-4At5g19460atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)C.G.S.X.
0.264e-21103Populus trichocarpaPtpAffx.216981.1.S1_x_atpmrna32072hypothetical protein-2e-21At5g19460atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)C.G.S.X.
0.104e-550Triticum aestivumTaAffx.92508.1.S1_atBJ261740--3e-5At5g19460atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)C.G.S.X.
0.032e-136Vitis vinifera1620789_s_atCF414942hypothetical protein LOC100249845-8e-1At5g22520unknown proteinC.G.S.X.
0.024e+032Zea maysZm.6976.1.A1_atAI065892--8e+0At5g24314PTAC7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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