Gene omics information

Query gene ID At5g19450
Gene name CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.114.1At5g19450832065CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)calcium-dependent protein kinase (CDPK19) mRNA, completeS.X.H.G.
0.3235.7At5g01270831743CPL2Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.S.X.H.G.
0.3032.1At3g50080824170VFB2 (VIER F-BOX PROTEINE 2)Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.S.X.H.G.
0.2522.6At2g35530818118bZIP transcription factor family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent, transcription, DNA-dependent, regulation of transcription;C:nucleus, chloroplast;MOPFBVAS.X.H.G.
0.2319.3At3g54230824590nucleic acid binding / nucleotide binding / zinc ion bindingF:nucleotide binding, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOFPBAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
127.399.9GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
110.199.9GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
81.599.9GSM311293Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
77.999.9GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
62.399.8GSM311286Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
60.499.8GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
56.799.8GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
44.499.8GSM311283Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
43.699.8GSM311285Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
38.999.8GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8201467At5g12480831123CPK7 (calmodulin-domain protein kinase 7)calmodulin-domain protein kinase CDPK isoform 7 (CPK7)C.G.S.X.
0.286e-48192At3g51850824348CPK13member of Calcium Dependent Protein KinaseC.G.S.X.
0.355e-33143At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroC.G.S.X.
0.171e-27125At1g74740843813CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30)member of Calcium Dependent Protein KinaseC.G.S.X.
0.254e-27123At2g41860818786CPK14member of Calcium Dependent Protein KinaseC.G.S.X.
0.196e-2099At2g31500817708CPK24member of Calcium Dependent Protein KinaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-1067Glycine maxGma.3877.1.S1_atBU548211--1e-10At5g19450CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)C.G.S.X.
0.152e-1893Hordeum vulgareContig7135_atContig7135--4e-31At2g41860CPK14C.G.S.X.
0.133e-20101Oryza sativaOs07g0568600AK068315.1-Calcium-dependent protein kinase4e-25At2g41860CPK14C.G.S.X.
0.625e-86319Populus trichocarpaPtpAffx.200820.1.S1_x_atpmrna1604calcium dependent protein kinase 14-5e-116At5g12480CPK7 (calmodulin-domain protein kinase 7)C.G.S.X.
0.153e-1687Triticum aestivumTa.4580.2.S1_a_atBJ268280calcium-dependent protein kinase-8e-14At5g12480CPK7 (calmodulin-domain protein kinase 7)C.G.S.X.
0.175e-1891Vitis vinifera1618615_s_atCF211026--6e-104At3g51850CPK13C.G.S.X.
0.126e-1271Zea maysZm.15283.1.A1_atCO532462calcium-dependent protein kinase, isoform AK1-2e-16At3g57530CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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