Gene omics information

Query gene ID At5g19240
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At5g19240832044unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6781.6At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.6781.6At4g14365827080zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.6579.6At4g34150829563C2 domain-containing proteinF:unknown;P:response to cold;C:unknown;MPFOBVAS.X.H.G.
0.5773.8At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.5368.6At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.5267.4At4g12720826884NUDT7Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death.S.X.H.G.
0.5267.4At1g55450841992embryo-abundant protein-relatedF:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOAS.X.H.G.
0.5065.3At2g41100818709TCH3 (TOUCH 3)encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers.S.X.H.G.
0.4457.2At3g52400824405SYP122 (SYNTAXIN OF PLANTS 122)syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathwayS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.199.7E-MEXP-807-raw-cel-1173273144
25.699.7E-MEXP-807-raw-cel-1173273252
24.899.6E-MEXP-807-raw-cel-1173273060
24.599.6GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.399.6GSM134440St.Clair_1-65_322_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0
22.199.6E-MEXP-807-raw-cel-1173273196
20.899.6GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0
20.499.6GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
20.499.6E-MEXP-807-raw-cel-1173273116
19.899.6GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.611e-40167At5g19250832045unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;PC.G.S.X.
0.751e-34147At5g19230832043unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PC.G.S.X.
0.198e-1167At3g06035819776unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane, anchored to membrane;PBC.G.S.X.
0.023e-136At5g49630835025AAP6 (AMINO ACID PERMEASE 6)Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.C.G.S.X.
0.011e+034At5g39020833894protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.031e+034At4g26730828780methyltransferaseF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;POBC.G.S.X.
0.031e+034At4g05010825843F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.011e+034At3g27860822406PWWP domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFBC.G.S.X.
0.011e+034At1g07620837275-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Glycine maxGmaAffx.33644.1.S1_atBU927355--5e-2At5g19240unknown proteinC.G.S.X.
0.046e-134Hordeum vulgareEBro03_SQ008_J07_s_atEBro03_SQ008_J07--8e-1At5g19240unknown proteinC.G.S.X.
0.034e-240Oryza sativaOsAffx.6398.1.A1_at---0C.G.S.X.
0.051e-138Populus trichocarpaPtp.1318.2.S1_s_atCF229390hypothetical protein-6e-6At5g19250unknown proteinC.G.S.X.
0.045e-342Triticum aestivumTaAffx.9498.1.S1_atCA596788--4e+0At4g11870unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1619999_atCD799397hypothetical protein LOC100261404-8e-1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)C.G.S.X.
0.032e+032Zea maysZm.3689.1.A1_atAW042272--5e-2At5g28770BZO2H3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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