Gene omics information

Query gene ID At5g19040
Gene name IPT5
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At5g19040832023IPT5Encodes cytokinin synthase.S.X.H.G.
0.4050.8At2g04800815024unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PS.X.H.G.
0.2930.3At5g05790830464myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOS.X.H.G.
0.2726.2At1g01640839534speckle-type POZ protein-relatedF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVFS.X.H.G.
0.1811.4At1g18880838469proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
276.0100.0GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
203.5100.0GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
166.9100.0GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
146.199.9GSM142628MC002_ATH1_A2.3-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
144.199.9GSM142627MC002_ATH1_A2.2-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
141.399.9GSM142626MC002_ATH1_A2.1-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
86.199.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
81.199.9GSM157310Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architecture
80.699.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
77.099.9GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.103e-859At3g23630821943ATIPT7Encodes an isopentenyl transferase involved in cytokinin biosynthesis.C.G.S.X.
0.072e-654At3g63110825486ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3)Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.C.G.S.X.
0.011e-138At5g36950833665DegP10 (DegP protease 10)Encodes a putative DegP protease.C.G.S.X.
0.021e-138At3g52500824415aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:cell wall, membrane, plant-type cell wall;PMFOC.G.S.X.
0.025e-136At2g36690818241oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.015e-136At1g03910839371-F:unknown;P:unknown;C:unknown;MOFPBVAC.G.S.X.
0.015e-136At1g69990843336leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAC.G.S.X.
0.022e+034At3g19160821450ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES)Encodes cytokinin synthase.C.G.S.X.
0.032e+034At3g50980824262XERO1 (DEHYDRIN XERO 1)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxPsAffx.CL2166Contig1_atPsAffx.CL2166Contig1--1e+0At2g16070PDV2 (PLASTID DIVISION2)C.G.S.X.
0.039e-134Hordeum vulgareEBem09_SQ005_D09_atEBem09_SQ005_D09--2e-1At1g66630seven in absentia (SINA) family proteinC.G.S.X.
0.026e-240Oryza sativaOsAffx.14808.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.214419.1.S1_atpmrna28046hypothetical protein-9e-1At2g17300unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.54107.1.S1_s_atCA685701--7e-2At5g19040IPT5C.G.S.X.
0.022e+032Vitis vinifera1608035_atCF208115hypothetical protein LOC100248116-3e-1At3g02100UDP-glucoronosyl/UDP-glucosyl transferase family proteinC.G.S.X.
0.032e-136Zea maysZmAffx.596.1.A1_atAI715024--8e-1At1g21940unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009691The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00908Link to KEGG PATHWAYZeatin biosynthesis
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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