CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g18200

Gene name UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g18200 831938 UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase encodes an adenylyltransferase S.X. H.G.
0.57 73.8 At1g51390 841563 NFU5 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU4 than to NFU1,2, and 3. Targeted to the mitochondrion. S.X. H.G.
0.47 61.2 At1g79810 844320 TED3 (REVERSAL OF THE DET PHENOTYPE 3) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes. S.X. H.G.
0.47 61.2 At4g38170 829973 FRS9 (FAR1-related sequence 9) F:zinc ion binding;P:response to red or far red light;C:cellular_component unknown;PMF S.X. H.G.
0.45 58.3 At3g27320 822351 hydrolase F:hydrolase activity;P:metabolic process;C:unknown;BOPFMAV S.X. H.G.
0.43 55.3 At4g31150 829243 endonuclease V family protein F:endonuclease activity;P:DNA repair;C:cellular_component unknown;BAOMPF S.X. H.G.
0.40 50.8 At1g11060 837647 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBPOF S.X. H.G.
0.38 46.7 At2g41020 818702 WW domain-containing protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFP S.X. H.G.
0.36 43.6 At5g11040 830971 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP S.X. H.G.
0.36 43.6 At3g63270 825502 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.7 99.8 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
36.6 99.7 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.0 99.7 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.0 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.2 99.7 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.3 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.6 99.7 GSM133759 Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
25.5 99.7 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
24.3 99.6 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.8 99.6 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 3e-2 40 At5g45850 834625 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM C.G. S.X.
0.02 5e-1 36 At5g53680 835449 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFB C.G. S.X.
0.03 5e-1 36 At2g45860 819194 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 5e-1 36 At1g24265 839041 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO C.G. S.X.
0.02 2e+0 34 At5g65420 836667 CYCD4 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. C.G. S.X.
0.01 2e+0 34 At5g39560 833952 - F:molecular_function unknown;P:unknown;C:chloroplast;MPOBVAF C.G. S.X.
0.01 2e+0 34 At4g10520 826644 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.01 2e+0 34 At4g10530 826645 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 8e-7 56 Glycine max Gma.8033.1.A1_at BU547431 - - 3e-7 At5g18200 UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig13418_at Contig13418 - - 1e-4 At1g65790 ARK1 (A. THALIANA RECEPTOR KINASE 1) C.G. S.X.
0.06 2e-2 42 Oryza sativa OsAffx.28327.1.S1_at - - - 0 C.G. S.X.
0.20 2e-19 97 Populus trichocarpa PtpAffx.5654.1.A1_at CV240270 hypothetical protein - 3e-19 At5g18200 UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.54234.1.S1_at CA684139 - - 2e+0 At5g58530 glutaredoxin family protein C.G. S.X.
0.20 2e-16 85 Vitis vinifera 1617266_at CB920220 hypothetical protein LOC100262243 - 7e-16 At5g18200 UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase C.G. S.X.
0.03 2e-1 36 Zea mays Zm.19282.1.A1_at CO518549 galactose-1-phosphate uridyl transferase-like protein - 4e-1 At3g03400 calmodulin-related protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0080040 Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.
S GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00134 UDP-Sugar metabolism

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00052 Galactose metabolism
00520 Amino sugar and nucleotide sugar metabolism
01100 Metabolic pathways
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