Gene omics information

Query gene ID At5g17950
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g17950831662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9897.8At1g23610838971unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9897.8At1g23910839002-F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.9697.3At4g02910828141unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9697.3At2g37610818338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9597.0At5g12450831120-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9496.7At1g33000840195transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.9496.7At2g01310814659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9496.7At4g16930827401disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.9296.0At1g65170842824ubiquitin carboxyl-terminal hydrolase family proteinF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
503.9100.0E-MEXP-509-raw-cel-829148525
430.4100.0E-MEXP-509-raw-cel-829148561
367.6100.0E-MEXP-509-raw-cel-829148597
292.4100.0E-MEXP-509-raw-cel-829148201
262.5100.0E-MEXP-509-raw-cel-829148165
246.3100.0E-MEXP-509-raw-cel-829148385
226.6100.0E-MEXP-509-raw-cel-829148420
180.5100.0E-MEXP-509-raw-cel-829148090
176.3100.0E-MEXP-509-raw-cel-829148348
173.2100.0E-MEXP-509-raw-cel-829148276
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.017e-134At3g16940820950calmodulin-binding proteinF:transcription regulator activity, calmodulin binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.017e-134At1g53090841743SPA4 (SPA1-RELATED 4)Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.C.G.S.X.
0.023e+032At2g27690817315CYP94C1Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.C.G.S.X.
0.013e+032At2g32950817857COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.C.G.S.X.
0.013e+032At1g79640844303ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAC.G.S.X.
0.011e+130At5g18190831937protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.031e+130At5g14490831300anac085 (Arabidopsis NAC domain containing protein 85)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxHgAffx.16118.1.S1_atCB280238--3e+0At5g17950unknown proteinC.G.S.X.
0.061e+032Hordeum vulgareHVSMEg0002C10r2_atHVSMEg0002C10r2--1e+0At5g17950unknown proteinC.G.S.X.
0.024e-446Oryza sativaOs02g0708600AK108743.1-Nuclear protein SET domain containing protein1e-3At5g17950unknown proteinC.G.S.X.
0.054e+032Populus trichocarpaPtpAffx.218422.1.S1_atpmrna34029hypothetical protein-7e-8At5g67060HEC1 (HECATE 1)C.G.S.X.
0.073e+032Triticum aestivumTa.20198.1.S1_atCA674820--7e-1At1g61820BGLU46 (BETA GLUCOSIDASE 46)C.G.S.X.
0.048e-132Vitis vinifera1616510_atBQ800125--1e+0At1g67635-C.G.S.X.
0.025e+030Zea maysZm.2272.1.A1_atBM347598Autophagy-related 12-1e-5At1g54210ATG12A (AUTOPHAGY 12 A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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