CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g17170

Gene name ENH1 (enhancer of sos3-1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g17170 831581 ENH1 (enhancer of sos3-1) F:protein binding, electron carrier activity, metal ion binding;P:unknown;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;BPO S.X. H.G.
0.71 84.2 At5g58260 835938 - Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. S.X. H.G.
0.65 79.6 At1g32080 840100 membrane protein, putative F:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, membrane, chloroplast envelope;BOFPA S.X. H.G.
0.62 77.3 At5g36700 833635 PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1) F:phosphoglycolate phosphatase activity;P:metabolic process;C:chloroplast stroma, chloroplast;BOMFAP S.X. H.G.
0.60 75.7 At2g39470 818532 PPL2 (PsbP-like protein 2) F:calcium ion binding;P:photosynthesis;C:in 6 components;PBO S.X. H.G.
0.58 73.8 At1g64680 842776 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PBO S.X. H.G.
0.58 73.8 At5g13650 831209 elongation factor family protein F:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:chloroplast, chloroplast stroma;BOMFPA S.X. H.G.
0.57 73.8 At1g26220 839163 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:chloroplast;BOPA S.X. H.G.
0.57 73.8 At1g56500 842103 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, oxidoreductase activity, catalytic activity;P:metabolic process, cell redox homeostasis;C:chloroplast, chloroplast stroma;BOMPAFV S.X. H.G.
0.57 73.8 At1g55480 841995 binding / protein binding F:protein binding, binding;P:unknown;C:chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope;PBOMF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.2 99.1 GSM260878 A1-Greco-Bou GSE10322 Higher order transcriptional regulation conferred by the bountiful gain of function mutant
8.5 99.0 GSM131106 Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1 GSE5614 Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
8.2 99.0 GSM133399 Knight_2-1_wildtype-lt_Rep1_ATH1 GSE5710 Dark-induced gene expression in sfr6
8.1 98.9 GSM131464 AtGen_6-9512_Heatstress(3h)+9hrecovery-Shoots-12.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
8.1 98.9 GSM260879 A2-Greco-WT GSE10322 Higher order transcriptional regulation conferred by the bountiful gain of function mutant
8.0 98.9 GSM131260 AtGen_6-1112_Cold(4°C)-Shoots-0.5h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
7.7 98.9 GSM133827 Walters_A-06-Kruger-WH3_REP3 GSE5737 Carbohydrate- and redox-regulation of gene expression in a TPT mutant
7.3 98.8 GSM131104 Broadley_1-2_A2-Bo-P-phosphate-starved_Rep1_ATH1 GSE5614 Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
7.1 98.8 E-TABM-18-raw-cel-489542751
7.1 98.8 GSM133826 Walters_A-05-Kruger-WH2_REP2 GSE5737 Carbohydrate- and redox-regulation of gene expression in a TPT mutant
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 3e-2 40 At3g15060 820735 AtRABA1g (Arabidopsis Rab GTPase homolog A1g) F:GTP binding;P:response to cadmium ion;C:unknown;MOFPBAV C.G. S.X.
0.01 4e-1 36 At3g51350 824298 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAV C.G. S.X.
0.02 4e-1 36 At3g10400 820203 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV C.G. S.X.
0.01 4e-1 36 At1g79620 844301 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.02 4e-1 36 At1g27190 839608 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:nucleus, plasma membrane;PMOBFVA C.G. S.X.
0.03 4e-1 36 At1g07410 837253 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:endosome, plasma membrane, cell plate;MOFPBAV C.G. S.X.
0.02 2e+0 34 At5g37415 833717 sequence-specific DNA binding / transcription factor F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 2e-62 240 Glycine max Gma.13129.1.S1_at CD404336 - - 2e-62 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.26 2e-10 65 Hordeum vulgare Contig4014_at Contig4014 - - 5e-10 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.19 1e-21 105 Oryza sativa Os08g0162600 AK060121.1 - Rubredoxin-type Fe(Cys)4 protein family protein 6e-22 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.35 1e-35 151 Populus trichocarpa PtpAffx.133398.1.A1_at CV278665 hypothetical protein - 8e-27 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.22 2e-9 63 Triticum aestivum Ta.5590.2.S1_at CK214552 - - 7e-7 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.11 2e-28 125 Vitis vinifera 1610210_at CA812095 hypothetical protein LOC100263114 - 8e-28 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
0.05 8e-10 63 Zea mays Zm.3400.1.S1_at CN845120 - - 2e-9 At5g17170 ENH1 (enhancer of sos3-1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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